agnes-the-ai-analyst/cli/skills/deploy.md
ZdenekSrotyr 1563b05f2e refactor(cli): hard-cutover env vars + config dir to AGNES_*
Task 0.5 of clean-analyst-bootstrap. Greenfield rewrite — no fallback,
no aliases. Existing dev environments lose their cached PAT and must
re-authenticate.

Env var renames (hard cutover):
- DA_CONFIG_DIR    -> AGNES_CONFIG_DIR
- DA_SERVER        -> AGNES_SERVER
- DA_SERVER_URL    -> AGNES_SERVER_URL  (test-only stale ref, not in spec)
- DA_NO_UPDATE_CHECK -> AGNES_NO_UPDATE_CHECK
- DA_LOCAL_DIR     -> AGNES_LOCAL_DIR
- DA_TOKEN         -> AGNES_TOKEN
- DA_STREAM_RETRIES -> AGNES_STREAM_RETRIES

Config dir rename: ~/.config/da/ -> ~/.config/agnes/ (across code,
comments, docstrings, error messages, install templates, dev scripts).

Stale `da X` references in CLI source (and adjacent app/, tests/):
swept docstrings, comments, help text, and error messages where the
verb survives the rewrite (init, pull, push, catalog, status, diagnose,
auth, admin, skills, query, schema, describe, explore, disk-info,
snapshot, login, logout, whoami, server, setup) and replaced `da X`
with `agnes X`. Intentionally kept `da sync`, `da fetch`, `da analyst`,
`da metrics` — those verbs are removed in later tasks; the legacy
strings will be detected by `_LEGACY_STRINGS` (added in Task 2).

Test fixes:
- TestCLIVersion now asserts output starts with `agnes ` (was `da `).

Test results: 2675 passed, 25 skipped (full pytest run, excluding 9
pre-existing test_db.py / test_user_management.py / test_e2e_extract.py
/ test_cli_binary_rename.py failures unrelated to this rename).
2026-05-04 16:35:44 +02:00

3.8 KiB

Deploy — Complete server deployment guide for AI agents

Prerequisites

You need:

  • A Linux server with SSH access (Ubuntu 22.04+ recommended)
  • Docker + Docker Compose installed on the server
  • A domain pointing to the server IP (optional but recommended for SSL)
  • Keboola Storage Token + Stack URL + Project ID (for data source)

Step-by-step deployment

1. Connect to server

ssh user@your-server-ip

2. Clone the repository

git clone https://github.com/keboola/agnes-the-ai-analyst.git /opt/data-analyst
cd /opt/data-analyst
git checkout main

3. Create .env file

cp config/.env.template .env

Edit .env with these REQUIRED values:

JWT_SECRET_KEY=<random 32+ char string>
DATA_DIR=/data
DATA_SOURCE=keboola
KEBOOLA_STORAGE_TOKEN=<your token>
KEBOOLA_STACK_URL=https://connection.keboola.com
KEBOOLA_PROJECT_ID=<your project id>

Generate a random JWT secret:

python3 -c "import secrets; print(secrets.token_urlsafe(32))"

4. Start Docker

docker compose up -d

Wait for health check:

sleep 5
curl http://localhost:8000/api/health

Expected: {"status": "healthy", ...}

5. Bootstrap first admin user

From your LOCAL machine (not the server):

agnes setup init --server http://SERVER_IP:8000
agnes setup bootstrap admin@company.com

Or directly via curl:

curl -X POST http://SERVER_IP:8000/auth/bootstrap \
  -H "Content-Type: application/json" \
  -d '{"email": "admin@company.com", "name": "Admin"}'

This returns a JWT token. Save it.

6. Trigger first data sync

agnes setup first-sync

Or via curl:

curl -X POST http://SERVER_IP:8000/api/sync/trigger \
  -H "Authorization: Bearer <TOKEN>"

7. Verify everything works

agnes setup verify --json

Expected: all checks PASS.

8. Add more users

agnes admin add-user analyst@company.com --role analyst

Troubleshooting

Server not reachable

# Check containers
docker compose ps

# Check logs
docker compose logs app --tail 50

# Restart
docker compose restart app

Data sync fails

# Check logs
docker compose logs app --tail 50 | grep -i error

# Common issues:
# - KEBOOLA_STORAGE_TOKEN expired → get new token
# - KEBOOLA_STACK_URL wrong → check URL
# - data_description.md missing → needs table configuration

No tables after sync

# Check if data_description.md exists
docker compose exec app ls /data/docs/data_description.md

# Check sync state
curl -H "Authorization: Bearer <TOKEN>" http://SERVER_IP:8000/api/sync/manifest

Out of memory

# Check memory
docker stats --no-stream

# Increase Docker memory limit in docker-compose.yml:
# services.app.deploy.resources.limits.memory: 4g

For Google OAuth (optional)

  1. Go to https://console.cloud.google.com/apis/credentials
  2. Create OAuth 2.0 Client ID (Web application)
  3. Add authorized redirect URI: https://your-domain.com/auth/google/callback
  4. Add to .env:
    GOOGLE_CLIENT_ID=<client id>
    GOOGLE_CLIENT_SECRET=<client secret>
    
  5. Restart: docker compose restart app

For SSL (optional)

Use Caddy as reverse proxy (simplest auto-SSL):

# Install Caddy
apt install caddy

# /etc/caddy/Caddyfile
your-domain.com {
    reverse_proxy localhost:8000
}

# Restart
systemctl restart caddy

Agent deployment flow (automated)

An AI agent should follow this sequence:

  1. ssh user@server — connect
  2. Clone repo, create .env
  3. docker compose up -d — start
  4. curl /api/health — verify server
  5. curl -X POST /auth/bootstrap — create admin
  6. curl -X POST /api/sync/trigger — sync data
  7. Wait 30-60 seconds
  8. curl /api/sync/manifest — verify data
  9. Report success with URL + admin credentials