Devin Review iter #5 flagged a pre-existing class of name/id mismatch
in app/api/query.py:131-136 — the SAME root cause as the bq.* RBAC
issue I fixed in iter #3 (line 332/362). Devin called it out as
"NOT introduced by this PR" / "might merit follow-up", but it's
exactly the same security-boundary pattern this PR is hardening, so
fixing here keeps the RBAC story consistent across the handler.
The `forbidden = all_views - set(allowed)` comparison mixed types:
- `all_views` carries DuckDB master view names (= registry display
`name` from the orchestrator's CREATE VIEW)
- `set(allowed)` carries registry IDs (resource_grants.resource_id)
When `id != name` (e.g. id="bq.finance.ue", name="ue"), authorized
users got spurious 403s — the view name landed in `forbidden` even
though the caller had a valid grant on the registry id.
Build a name->id map from the registry, then the forbidden check
compares apples to apples:
allowed_view_names = {r["name"] for r in registry_rows
if r.get("name") and r.get("id") in allowed_ids}
forbidden = all_views - allowed_view_names
107 affected tests pass; 487 pass in wider RBAC/query/access/admin
domain — no regressions.
Devin Review iter #3 found 3 new real bugs after iter #2's fixes landed.
🔴 RBAC check at app/api/query.py:362 used `row["name"]` against
`accessible_set`, but `accessible_set` is keyed by registry IDs
(`get_accessible_tables` returns `resource_grants.resource_id` —
table IDs, not display names). Confirmed by `_table_blocks` projection
at `app/resource_types.py:157-158`. When `id != name` (e.g.
`id="bq.finance.ue", name="ue"`), non-admin users with valid grants
got 403 `bq_path_access_denied`. Switch to `row["id"]`.
🚩 Bare-name pass at app/api/query.py:332 had the same name-vs-id
mismatch (different impact): legitimate accessible rows were skipped
from `dry_run_set`, so the cost guardrail under-counted scan bytes
for non-admin users. Could let an over-cap query through and
under-bill quota. Switch to `row_id` comparison.
🟡 `placeholder_from` for billing_project was dead code.
`_BQ_OPTIONAL_FIELD_DEFAULTS["billing_project"] = ""` seeded an empty
string into every GET payload via `_ensure_bq_optional_fields`. JS
`isUnset = (value === undefined)` evaluated False, so the
`(defaults to <project>)` placeholder NEVER rendered. Drop the seed —
field stays in `known_fields` (UI sees it) but routes through the
unset rendering path on GET, where placeholder_from fires.
Tests: test_get_surfaces_bq_fields_even_when_unset assertion flipped
from "billing_project IS present" to "billing_project NOT auto-seeded"
to lock in the new shape. 67 affected tests pass.
Devin Review iter #2 found 2 new issues (after iter #1's 5 fixes
landed). Both real, both addressed.
🔴 Quota user_id key mismatch defeated shared daily budget. /api/query
computed `user.get("id") or user.get("email")` while /api/v2/scan uses
`user.get("email") or "anon"` (app/api/v2_scan.py:327). Same user → two
different keys in the singleton QuotaTracker. BQ bytes consumed via
/api/query were tracked under UUID; via /api/v2/scan under email; the
`check_daily_budget` pre-flight on either endpoint never saw the
other's recorded bytes — per-user cap was effectively doubled. Match
v2/scan's email-first ordering.
🟡 QuotaExceededError(KIND_CONCURRENT) → 400 instead of 429.
`quota.acquire(user_id)` raises this from __enter__ when the per-user
concurrent-scan slot is at cap. The exception propagated through the
@contextlib.contextmanager generator, the caller's `with guard:`
block, and was caught by execute_query's generic `except Exception`
handler → mapped to 400 with a flattened "Query error: concurrent_scans:
N/M" string, dropping the typed retry_after_seconds field. Wrap the
`with quota.acquire(...)` in a try/except QuotaExceededError that maps
to 429 with the same typed-detail shape used for the daily-budget
rejection — consistent with /api/v2/scan:392-402.
Tests: test_api_query_quota.py user_id strings updated to
"admin@test.com" (the seeded_app admin's email) to match the new
email-first ordering. 40 affected tests pass.
Devin Review on PR #168 found 5 issues — all real, all addressed.
🚩 ANALYSIS_001 (architectural): concurrent-slot guard didn't protect
actual BQ query execution. Earlier `_enforce_remote_bq_quota_and_cap`
ran dry-run + cap check inside `with quota.acquire(user_id):`, then
returned — releasing the slot BEFORE `analytics.execute(...)` ran. Spec
§4.3.3 explicitly designs the slot to wrap execute so the per-user
concurrent cap limits BQ scans, not just dry-runs.
Refactor to a context manager `_bq_quota_and_cap_guard`. Caller's `with`
block now holds the slot through dry-run, cap check, the actual
`analytics.execute(...)` (which is what triggers the BQ scan when DuckDB
resolves the master view), AND the post-flight record_bytes. Slot
released only when caller's `with` body exits.
🟡 BUG_001: placeholder JS walked `original` (full GET payload root)
instead of `original.sections`. `placeholder_from: ["data_source",
"bigquery", "project"]` is a section-relative path, so billing_project
placeholder NEVER rendered. Fix: walk `original.sections` (with fallback
to `original` for safety).
🟡 BUG_002 + BUG_003: admin_tables.html register and edit modals'
operator help text referenced `max_bytes_per_remote_query` (the old
name from the spec) but the actual config key is `bq_max_scan_bytes`
after the fix-up commit `6423888d` moved it. Replace both occurrences.
🟡 BUG_004: CHANGELOG entry said `api.query.bq_max_scan_bytes` (the
old path) but the read at app/api/query.py:53 is
`get_value("data_source", "bigquery", "bq_max_scan_bytes", ...)`. An
operator who set it under `api.query` in their yaml would have no
effect. Correct path in CHANGELOG.
All 95 #160-affected tests pass after the changes.
E2E test on dev VM revealed: spec said "configurable via /admin/server-config"
for the cost guardrail cap, but the underlying read path was
`api.query.bq_max_scan_bytes` and `api` is NOT in `_EDITABLE_SECTIONS`. POST
to /admin/server-config rejected `{"sections":{"api":...}}` as "unknown
section(s): api" — the cap was only adjustable via direct YAML edit.
Move to `data_source.bigquery.bq_max_scan_bytes`:
- `_default_remote_query_cap_bytes()` reads from the new path.
- Add to `_OPTIONAL_FIELDS["data_source"]["bigquery"]["fields"]` with the
same shape as `max_bytes_per_materialize` (kind=int, default 5 GiB, hint).
- Add to `_BQ_OPTIONAL_FIELD_DEFAULTS` so it surfaces in the GET payload
even when YAML omits it.
Convention now mirrors `max_bytes_per_materialize` — both BQ cost
guardrails live under `data_source.bigquery`, both editable in the UI.
Closes the operator-side half of the reporter's loop. The CLI fix in
the previous commit makes USER_PROJECT_DENIED errors readable to
analysts; this commit lets admins verify reachability proactively
from /admin/server-config without waiting for analyst reports.
New endpoint POST /api/admin/bigquery/test-connection
(app/api/admin_bigquery_test.py, ~110 LOC):
- Depends(require_admin); registered in app/main.py.
- Builds BqAccess via existing get_bq_access(), runs `SELECT 1 AS ok`
with a 10s polling timeout.
- 200 with {ok, billing_project, data_project, elapsed_ms} on success.
- 400 for `BqAccessError(not_configured)` (operator config issue).
- 502 for any other typed BqAccessError or unknown upstream exception.
- 504 for concurrent.futures.TimeoutError; best-effort cancel_job
invoked (BQ-side cancel may still run; documented caveat).
Server-config placeholder (app/api/admin.py + admin_server_config.html):
- `data_source.bigquery.billing_project` field-spec gains
`placeholder_from: ["data_source", "bigquery", "project"]`.
- renderLeafInput's text branch reads `opts.spec.placeholder_from`,
walks the loaded `original` config dict, injects
`placeholder="(defaults to <project>)"` into the input HTML at
construction time. Admin sees the access.py:339-340 fallback rule
visible directly in the UI without reading source.
UI button:
- "Test BigQuery connection" button next to data_source's Save button.
- onTestBigQuery() POSTs to the endpoint, renders structured result
inline (green check + elapsed_ms on success; red kind + hint on
failure).
Tests: 6 endpoint cases + 1 placeholder payload test = 7 GREEN. 62
total across the affected admin server-config test files.
Phase 3 review identified an RBAC + cost-cap bypass: `SELECT * FROM
"bq"."ds"."tbl"` (catalog token quoted as a DuckDB identifier) was NOT
matched by the BQ_PATH regex, so direct quoted-form references skipped
both the registry check and the cost-cap dry-run. DuckDB resolves
`"bq"` to the same ATTACHed BQ catalog, so the bypass is real.
Widen the catalog-token alternation: `(?:"bq"|bq)` matches both forms.
Negative lookbehind `(?<![\w.])` still rejects look-alike prefixes
(`other_bq`, `my_bq`); the new "my_bq".ds.tbl negative test locks that
in alongside `other_bq.ds.tbl`.
Tests:
- 2 new positive cases in tests/test_query_bq_regex.py for the quoted
form (`"bq"."finance"."ue"` and uppercase `"BQ"."ds"."tbl"`).
- 1 new negative case rejecting `"my_bq".ds.tbl` so the quoted-form
widening doesn't open a different evasion.
- 1 new RBAC test in tests/test_api_query_rbac_bq_path.py: admin
hitting an unregistered quoted path returns the same
bq_path_not_registered 403 as the unquoted form.
All 33 Phase 3 tests pass after the fix.
The headline implementation for issue #160. POST /api/query now gates
direct `bq."<dataset>"."<source_table>"` references behind the registry
and bounds the BQ scan cost behind a configurable cap. Wired through
the same singleton QuotaTracker as /api/v2/scan so daily-byte budgets
are shared across both BQ-touching paths.
Changes in app/api/query.py:
- Add module-level `BQ_PATH` regex matching the 16 syntax variants
verified empirically (fully-quoted, unquoted, mixed quoting,
case-insensitive, inside CTE bodies, multi-path, …).
- Add `bigquery_query` to the SQL keyword blocklist. Closes the
pre-existing function-call backdoor where a user could run an
arbitrary BQ jobs API call against any reachable dataset, bypassing
the registry and RBAC. Wrap views internal to the BQ extractor still
use bigquery_query() — but those run via DuckDB view resolution at
query time, not via user-submitted SQL, so the blocklist doesn't
break them.
- Add `_bq_guardrail_inputs` helper: walks user SQL twice — once for
bare-name matches against accessible registered remote-BQ names
(contributes to dry_run_set), once for direct `bq.X.Y` matches
(gated against `find_by_bq_path` lookups, returns 403 with
structured detail on miss or grant violation).
- Add `_enforce_remote_bq_quota_and_cap` helper: pre-flight
`check_daily_budget` (over-cap → 429), then `with quota.acquire(...)`
wraps a per-path BQ dry-run, sums bytes, raises 400
`remote_scan_too_large` when total > cap.
- Cap default 5 GiB; configurable via `api.query.bq_max_scan_bytes`
in /admin/server-config (next phase wires the UI).
- Post-flight `record_bytes` against the user's daily counter.
- Module-level imports of `_bq_dry_run_bytes`, `_build_quota_tracker`,
`get_bq_access` so tests can monkeypatch via `app.api.query.<name>`.
Tests:
- All 23 RED tests from the previous commit now pass (regex matrix,
blocklist with detail-string assertion, RBAC unregistered/admin-bypass,
guardrail dry-run-called/over-cap-rejected, quota pre-flight 429).
- mock_dry_run fixture stubs both `_bq_dry_run_bytes` and `get_bq_access`
so guardrail tests don't require a live BQ project.
- Quota test uses `admin1` (the seeded_app fixture's actual user id, not
`admin`).
Smoke: 887 passed across query/bq/admin/extractor/registry/quota
domains. No regressions.
The /api/query cost guardrail (next phase) needs the same singleton
QuotaTracker so its daily-byte and concurrent-slot caps accumulate
across both /api/v2/scan and /api/query BQ-touching paths.
Move `_build_quota_tracker`, `_quota_singleton`, and `_quota_init_lock`
from app/api/v2_scan.py to app/api/v2_quota.py (the natural home; the
factory uses QuotaTracker which already lives there). Re-export the
function from v2_scan.py so the 7 test sites at tests/test_v2_scan.py
(lines 77, 118, 143, 160, 186, 208, 250) keep working without edits.
Crucially do NOT re-export `_quota_singleton` from v2_scan.py — Python
`from X import var` copies the binding at import time, so a re-exported
singleton would freeze at the initial None and never observe the
in-place mutation done inside `_build_quota_tracker()`. Re-export only
the function (which always reads the live module-global through `global`).
Mechanical refactor; no behavior change. 30 quota-related tests pass.
Now that VIEW/MATERIALIZED_VIEW always wrap via bigquery_query() (the
prior `legacy_wrap_views=True` branch behavior, made unconditional in
the previous commit), the toggle has no semantic meaning and is removed
across the codebase.
Production code:
- app/api/admin.py: drop the field from _OPTIONAL_FIELDS["data_source"]
["bigquery"]["fields"] and from _BQ_OPTIONAL_FIELD_DEFAULTS, plus the
comment block above the defaults dict.
- config/instance.yaml.example: drop the example snippet.
- src/orchestrator.py: update the inner-objects skip-branch comment to
reflect the new BQ behavior (the skip itself stays — keboola
use_extension=False still inserts _meta rows without inner views).
- app/web/templates/admin_tables.html: rewrite operator copy in the
register and edit forms to reflect always-wrap.
Tests:
- tests/test_admin_server_config.py (TestServerConfigBigQueryFields):
flip assertions from "field IS present" to "field NOT present" on
legacy_wrap_views. Drop the test_post_persists_legacy_wrap_views test
since the field no longer exists.
- tests/test_admin_server_config_known_fields.py: same flip on the
known-fields registry assertion.
- tests/test_bigquery_extractor.py: drop the obsolete
test_view_entity_does_not_create_master_view_by_default (asserted the
bug we fixed) and test_legacy_wrap_views_toggle_restores_old_behavior
(toggle no longer meaningful). Update remaining test docstrings.
Operators with `legacy_wrap_views: true` set in their overlay get the
new (equivalent) behavior automatically — the unrecognized key is
silently ignored by the YAML loader. Operators with `false` get the
issue-#160 fix as a behavior change, not a regression.
Spec gate updated: production code grep gate
grep -rn 'legacy_wrap_views' connectors app src config cli
must return zero. tests/ excluded — historical "removed in #160"
breadcrumbs and `assert "X" not in fields` regression guards retained
as anti-regression signals.
Finding #1: _build_context now routes through render_agent_prompt_banner when
a DB connection is available, so both /setup and the /dashboard clipboard CTA
always reflect the admin override (or the live default when no override is set).
Previously _build_context unconditionally used resolve_lines(), ignoring the
welcome_template override for the dashboard JS array.
Finding #2: PUT /api/admin/welcome-template now performs a second render pass
with user=None (anonymous stub) after the authenticated-user pass. Templates
that reference user.* fields without an {% if user %} guard are rejected with
a clear 400 error explaining the anon-visitor breakage.
- Fix#1: _detect_existing_project now checks .claude/settings.json for
"da sync" marker instead of deleted CLAUDE.md; update tests accordingly.
- Fix#2: preview endpoint uses autoescape=False to match /setup rendering;
align render_agent_prompt_banner in welcome_template.py to the same.
- Fix#3: apply _sanitize_banner_html to override render path in setup_page
so all render paths sanitize consistently.
- Fix#4: move .setup-link-banner into the existing-user branch where
account_details.last_sync_display is reachable; remove dead copy from
new-user branch.
The /admin/agent-prompt editor now pre-fills with the full bash bootstrap
script from setup_instructions.resolve_lines() instead of being empty.
When an admin saves an override it replaces the default everywhere — the
/setup page display and the dashboard clipboard CTA — rather than adding a
banner above the auto-generated commands.
GET /api/admin/welcome-template now returns a `default` field with the live
computed script so the editor always shows meaningful starting content.
{server_url} and {token} single-brace placeholders survive Jinja2 rendering
and are substituted by JavaScript at clipboard-copy time as before.
Preview pane switches to textContent (not innerHTML) since content is bash.
- src/welcome_template.py: rewrite as HTML banner renderer
(render_agent_prompt_banner); drop _list_tables, _metrics_summary,
_marketplaces_for_user, render_welcome, _load_default_template.
build_context now exposes only instance/server/user/now/today.
_sanitize_banner_html strips script/iframe/on*/javascript: post-render.
- app/api/welcome.py: drop get_welcome handler, WelcomeResponse, old
_VALIDATION_STUB_CONTEXT. Admin endpoints stay at same URLs; validation
stub updated to match new slim context. Preview now uses autoescape=True.
- app/web/router.py: setup_page calls render_agent_prompt_banner and passes
banner_html to install.html; admin_agent_prompt_page drops _load_default_template.
- app/web/templates/install.html: add .setup-banner CSS + banner block above hero.
- cli/commands/analyst.py: replace _generate_claude_md with _init_claude_workspace;
no CLAUDE.md written, only .claude/CLAUDE.local.md placeholder + settings.json hooks.
- tests: delete test_cli_analyst_welcome.py (tests deleted endpoint/function);
rewrite TestGenerateClaudeMd → TestInitClaudeWorkspace; update api test to
assert /api/welcome returns 404 and remove welcome-fetch tests.
Rename the welcome prompt editor from /admin/welcome to /admin/agent-prompt
and update all UI labels to "Agent Setup Prompt". API endpoint URLs are
unchanged (PUT/GET/DELETE /api/admin/welcome-template, GET /api/welcome).
- Nav menu: "Welcome prompt" → "Agent Setup Prompt", href updated
- Page title and h2 updated in admin_welcome.html
- Error message hint in app/api/welcome.py updated to /admin/agent-prompt
- Dashboard: replace inline <details> preview of _claude_setup_instructions
with a simple link to /setup (Task C)
- docs/welcome-template.md renamed to docs/agent-setup-prompt.md; internal
references to /admin/welcome updated
- OpenAPI snapshot path updated
- Tests updated to reflect new route and removed inline preview
Remove the setup_banner feature (admin-editable /setup page banner) and
all associated code: API router, repository, renderer, admin template,
tests, and docs. The setup_page handler no longer calls render_setup_banner;
the install.html template no longer renders banner_html. The setup_banner
DuckDB table (v22) is kept intact for forward-compat with already-migrated
instances — only the application code is removed.
CHANGELOG updated: setup_banner bullets removed; Agent Setup Prompt
(welcome-template feature) now stands alone as the single editable prompt.
- Add integrity= + crossorigin= to all 4 cdnjs tags in admin_welcome.html
and admin_setup_banner.html (I-1)
- Add graceful CDN fallback: when CodeMirror is undefined (SRI mismatch or
CDN down), degrade to styled plain textarea with polyfill editor interface
so save/reset/preview still work (I-1)
- Replace fixed 480px editor height with calc(100vh - 320px) for
viewport-relative sizing; add min-height: 480px to .welcome-editor-col (M-8)
- Change /install redirect from 301 to 302 to prevent indefinite browser
caching (I-5)
- Sanitize Jinja2 error detail in /api/welcome 500 response: log full error
server-side, return generic detail pointing at /admin/welcome (M-7)
- Hoist build_context import to module level in app/api/welcome.py (M-11)
Adds an optional Jinja2/HTML banner displayed above the bootstrap
commands on /setup. Empty by default; admin authors it at
/admin/setup-banner. autoescape=True — safe for HTML context.
Render failures return "" so a broken banner never breaks /setup.
Schema v22: setup_banner singleton table, auto-migration v21→v22.
* security(auth): per-IP rate limit on auth endpoints + generalize last-admin guard
Closes#45 and #151.
#45 — every auth endpoint was unthrottled (login, magic-link, token,
bootstrap), leaving us open to password brute-force and SMTP
email-bombing. Wires slowapi (new dep) into the middleware chain with
per-route limits: 10/min on login + token, 5/min on send-link, 3/min on
bootstrap. Returns 429 with Retry-After: 60 once exceeded. Per-IP key
respects the leftmost X-Forwarded-For hop (Caddy in front of the app
strips client-supplied XFF). Operator escape hatch:
AGNES_AUTH_RATELIMIT_ENABLED=0. Test suite disables the limiter via
autouse conftest fixture so existing auth tests that hammer endpoints
in tight loops are unaffected.
#151 — DELETE /api/admin/users/{id}/memberships/{group_id} and the
mirror DELETE /api/admin/groups/{group_id}/members/{user_id} only
guarded against self-removal as last admin. Generalizes to refuse
removing anyone from the seeded Admin group when they are the only
remaining active admin (mirrors the existing
count_admins(active_only=True) <= 1 check on delete_user / update_user).
Recovery from zero admins requires direct DB access, so this closes
a path where a scheduler/bootstrap actor that bypasses normal admin
checks could otherwise empty the group.
* security(auth): throttle remaining email-bombing + token-confirm endpoints
Address code-review gap on PR #165 — the first commit covered /send-link
but missed two endpoints with the IDENTICAL email-bombing surface:
- POST /auth/password/reset — sends reset mail, anti-enum response
- POST /auth/password/setup/request — sends setup mail, anti-enum response
Both now share the 5/min limit with /send-link.
Also add 10/min to the token-confirm surfaces — high-entropy tokens but
partial leaks via logs / referer have surfaced before, and unbounded
guess rate would let an attacker exhaust the keyspace adjacent to a
leaked prefix:
- POST /auth/email/verify
- GET /auth/email/verify — closes the click-through bypass
- POST /auth/password/reset/confirm
- POST /auth/password/setup/confirm
Doc fix: rate_limit.py module docstring + CHANGELOG entry no longer
claim "disable without a redeploy" (misleading). The Limiter constructor
freezes `enabled` from env at import time, matching every other Agnes
env knob — operators set the flag and bounce the container.
Tests: 4 new cases in test_auth_rate_limit.py covering
/reset, /setup/request, /reset/confirm, GET /verify. Full suite:
2583 passed, 32 skipped, 0 failed.
* security(auth): throttle JSON /auth/password/setup — closes form-throttle bypass
Second code-review pass on PR #165 caught a fifth gap: POST /auth/password/setup
(JSON variant, kept for backward compat) consumes the same setup_token as
the web form /setup/confirm but was unthrottled — an attacker brute-forcing
the token just switches from the form path to the JSON path and resumes
at unbounded RPS. Apply the same 10/min limit and signature shape used
on /setup/confirm.
Also extend CHANGELOG note about the JSON-variant bypass for future
operators reading the security entry.
Test: 1 new case (test_password_setup_json_rate_limited_after_10_requests),
9 rate-limit tests + 28 password-flow tests + 41 auth-provider tests pass,
no regressions.
* chore(release): cut 0.30.1 — auth security hardening (rate limit + last-admin guard)
E2E sub-agent finding: `da query --remote "SELECT * FROM <id>"` against a
materialized table that hasn't yet been rebuilt in the server's
analytics.duckdb returns a confusing DuckDB "Table does not exist"
message even though the table is in the registry. Materialized rows
produce parquets at `${DATA_DIR}/extracts/<source>/data/<id>.parquet`,
but the orchestrator's master-view creation is `_meta`-driven — fresh
instances or pre-tick states have the registry row without a
corresponding view, so analysts hit the bare "does not exist" with no
path forward.
Improve the error rendering in `app/api/query.py:execute_query`. When
DuckDB raises a "table does not exist" error, scan the registry for any
`query_mode='materialized'` row whose id or name appears in the failed
SQL. On a hit, return a 400 whose detail names the table, explains the
materialize state, and offers two concrete next steps:
1. Run `da sync` (or wait for the scheduler tick / hit
POST /api/sync/trigger) to materialize the parquet, OR
2. Query the source directly via the catalog alias when the registry row
carries bucket+source_table (e.g. `bq."dataset"."table"` for BigQuery,
`kbc."bucket"."table"` for Keboola).
Detection is bounded — the registry round-trip only fires when DuckDB's
error mentions a missing table, so happy-path queries pay no cost.
Non-materialized unknowns fall through to DuckDB's raw error.
2 new tests: materialized id surfaces the hint with the bucket+source_table
payload; unknown table falls back to the generic error path with no false
positive on the new hint.
The strict source_type-availability validator from the prior commit
broke ~12 existing tests that register tables on the default test
instance (where `data_source.type` resolves to 'local' since no
instance.yaml is loaded).
The intent of the validator is to catch *explicit* misconfig:
`type=bigquery` instance + `source_type=keboola` payload with no
`data_source.keboola.*` block. The bootstrap workflow — admin sets up
a fresh instance and registers a few tables before pointing at a real
source — should not be gated here.
Loosen the check: when `get_data_source_type()` returns 'local' (the
fallback when no `data_source.type` is set), skip the rejection. The
explicit mismatch case still 422s because that path resolves
`configured_primary` to a real source type.
Also adds an autouse keboola_instance fixture to test_journey_sync_query.py
which exercises Keboola registrations through the full sync→query
flow — the fixture documents the test's data-source assumption rather
than relying on the bootstrap escape hatch.
E2E sub-agent finding: instance configured with `data_source.type='bigquery'`
and no `data_source.keboola.*` block. Admin POSTs `{source_type: 'keboola'}`
to /api/admin/register-table → returns 201, row lands in the registry, but
never syncs because the scheduler has no Keboola URL/token to ATTACH
against. Operator only notices the gap when `da catalog` keeps showing
nothing.
The new `_validate_source_type_configured` helper runs immediately after
the id/view-name collision checks in `register_table`. A source_type is
considered configured when:
- it matches `get_data_source_type()` (the instance's primary), OR
- a non-empty `data_source.<source_type>` block exists in the effective
`instance.yaml` (multi-source instance), OR
- it's in `_SOURCE_TYPES_INDEPENDENT_OF_DATA_SOURCE` (Jira / local — both
get data through paths that don't involve `data_source.*`).
Returns 422 with a message that names the configured primary source and
points at `/admin/server-config` for enabling a secondary one. None /
empty source_type is still tolerated for backward compat with legacy CLI
scripts that don't set the field — the route resolves it later.
5 new tests cover: keboola-on-bq rejected, bq-on-keboola rejected,
matching source_type still works, jira allowed regardless, omitted
source_type passes through.
Existing tests that registered Keboola rows on the unconfigured default
test instance now opt into a `keboola_instance` fixture to satisfy the
new validator (tests/test_admin_bq_register.py + .keboola_materialized
+ .unregister_cleanup; the multi-source PUT test in test_admin_bq_register
adds a `keboola` block to its synthetic config).
Pre-existing test_missing_project_returns_error failure in
TestRebuildFromRegistry is unrelated (config-cache leakage from a
previous test in the same class) — confirmed pre-existing on the prior
commit via `git stash` reproduction.
E2E sub-agent finding: register a materialized BQ row → sync to materialize
the parquet at `/data/extracts/bigquery/data/<id>.parquet` → DELETE the
registry row. The DB row goes away but:
- the parquet file stays on disk forever, AND
- the sync_state row stays, so `/api/sync/manifest` keeps advertising the
dropped table to `da sync`, AND
- the orchestrator's next rebuild can resurrect a master view by picking
up the leftover parquet.
Two-part fix in `unregister_table`:
1. For materialized rows on bigquery/keboola, remove
`${DATA_DIR}/extracts/<source_type>/data/<name>.parquet` (and any stale
`<name>.parquet.tmp` from a crashed prior materialize). Filename is
keyed on `table_registry.name` to match sync_state bookkeeping.
File-removal errors are logged but don't fail the DELETE — the registry
row is already gone, and an orphan parquet won't get a master view at
next rebuild because the orchestrator's _meta-driven scan never picks
up bare parquet files.
2. Always clear `sync_state` + `sync_history` rows for the dropped table_id
so the manifest stops advertising the table — applies to all source
types and modes, not just materialized, since any synced row had a
sync_state entry.
Orchestrator-side defensive guard (Finding 2b) is a no-op in the current
implementation: `_attach_and_create_views` only creates master views from
`_meta` rows in each connector's `extract.duckdb`, so a parquet without a
matching `_meta` entry is already invisible to the rebuild. The new
test `test_orchestrator_skips_orphan_parquet_in_extracts` is kept as a
regression guard for that contract.
5 tests cover: BQ + Keboola materialized DELETE removes parquet, remote
DELETE doesn't error trying to remove a non-existent file, sync_state
cleared on DELETE, orchestrator orphan-skip invariant.
E2E testing showed admin POSTs of materialized BQ rows whose source_query
uses BigQuery-native backtick identifiers (`prj.ds.t`) silently no-op'd at
the next sync tick — the materialize path runs the SQL through the DuckDB
BQ extension's COPY which uses DuckDB's parser; backticks aren't recognized
and the query either parse-errors or matches zero rows. No parquet lands at
the canonical path and no error reaches an operator-visible surface.
Two-part fix:
1. RegisterTableRequest's _check_mode_query_coherence model_validator now
rejects any source_query containing a backtick with a 422 + actionable
message pointing at the DuckDB equivalent (bq."dataset"."table"). Same
check is applied in update_table on the merged record so PATCHes that
flip a stored source_query to backtick form are also caught. Covers BQ
AND Keboola materialized rows since both connectors funnel source_query
through DuckDB's COPY.
2. _run_materialized_pass now persists per-row failures via the new
SyncStateRepository.set_error / clear_error methods (existing
sync_state.error / status columns — no schema migration). GET
/api/admin/registry enriches each row with `last_sync_error` from a
single batched SELECT against sync_state, so the admin UI / da admin
status can show "this table failed last sync because: X" instead of
operators having to trawl scheduler logs. Recovered rows have the
error cleared automatically — update_sync's success path resets
status='ok' / error=NULL on the upsert.
The materialized-path test fixture's _materialized_payload helper is
updated to use DuckDB-flavor SQL (the prior backtick example pre-dated the
fix). 6 new tests cover register/update rejection on BQ + Keboola, the
sync_state error persistence, and the registry response surface.
Devin's second review pass on commit 16938ae7 surfaced 2 more issues:
BUG_pr-review-job-58ae3148_0001 — non-BQ materialized via PUT bypasses source_query check
app/api/admin.py update_table only enforces 'query_mode=materialized
requires source_query' for source_type='bigquery' rows (via the
synthetic RegisterTableRequest at line 2129+). Non-BQ source types
(Keboola) skip the check — admin could PUT {query_mode: materialized}
on a Keboola local row without source_query, persist successfully,
then crash at the next sync tick when kb_materialize_query received
sql=None and DuckDB rejected COPY (None) TO '...'.
Fix: generic coherence guard before the BQ-specific block — for ALL
source types, query_mode='materialized' requires non-empty source_query
in the merged record. Returns 422 with a hint about reverting via
query_mode='local'/'remote'.
ANALYSIS_pr-review-job-642ff90f_0007 — diagnose returns 'ok' on BQ resolution failure
app/api/health.py:_check_bq_billing_project caught get_bq_access()
exceptions and returned status='ok' with a 'could not resolve' detail.
Automated alerting keyed on status != 'ok' would silently miss missing
google-cloud-bigquery, auth failures, or malformed config. Fix: return
status='unknown' on resolution failure — surfaces it on operator
dashboards without promoting the overall health to 'degraded' (which
'warning' does, intentionally for the billing==project case).
Tests:
- test_update_keboola_to_materialized_without_source_query_rejected:
PUT {query_mode: materialized} on a Keboola local row returns 422
with 'source_query' in the detail
- test_diagnose_returns_unknown_status_when_bq_resolution_fails:
when get_bq_access raises, the bq_config service entry surfaces
status='unknown' (not 'ok')
Full sweep: 2507 passed, 25 skipped, 0 failed (+2 from previous sweep
because of the 2 new regression tests; 8 pre-existing internal_roles
schema-migration failures still ignored per task brief).
Devin Review on commit 7052a235 flagged 4 real bugs in the Keboola
materialized path. All four are fixed; 3 new regression tests pin the
behavior so future refactors can't quietly regress.
BUG_pr-review-job-3fbd31c9_0001 — _run_materialized_pass gated behind 'if bq_project:'
app/api/sync.py:444-466 wrapped the entire materialized pass (which
dispatches BOTH BigQuery AND Keboola rows by source_type) in a check
for data_source.bigquery.project being non-empty. On Keboola-only
instances this short-circuited and Keboola materialized rows sat in
table_registry forever without their SQL being evaluated — the feature
CHANGELOG advertised was dead code on the most common deployment shape.
Fix: always run the materialized pass; the BQ branch's per-row try/except
catches the typed BqAccessError(not_configured) the sentinel raises
when no BQ project is set, so non-BQ instances incur a per-row error
for any (hypothetical) BQ-tagged row but the Keboola path runs cleanly.
Log line renamed 'Materialized BQ' → 'Materialized SQL' to match.
BUG_pr-review-job-3fbd31c9_0004 — wrong config key 'url' instead of 'stack_url'
app/api/sync.py:149 read get_value('data_source', 'keboola', 'url'),
but the canonical config key documented in instance.yaml.example:111
and used by app/api/admin.py:1503 + 2359 is 'stack_url'. Production
Keboola instances would always see an empty URL and fail with the
'not configured' error. The pre-existing test patched the wrong key
too, so it passed without catching the mismatch. Fix: use stack_url
in both sync.py and the test fixture.
BUG_pr-review-job-3fbd31c9_0003 — no atomic write in Keboola materialize_query
connectors/keboola/extractor.py wrote COPY directly to the final
'<id>.parquet' path. A mid-COPY failure (network, disk full, extension
crash) left a partial parquet that the orchestrator rebuild would
later pick up and serve to analysts. BQ's materialize_query already
uses a '<id>.parquet.tmp' staging path + os.replace() atomic swap
(connectors/bigquery/extractor.py:370-445); Keboola now mirrors that
pattern with the same try/except cleanup on COPY failure.
BUG_pr-review-job-3fbd31c9_0002 — full file read into memory for MD5
Same file:60-62 used parquet_path.read_bytes() for the MD5 hash.
Multi-GB Keboola materialized results would OOM on memory-constrained
containers. BQ's version uses streaming 8 KiB-chunk hashing
(connectors/bigquery/extractor.py:438-442); Keboola now mirrors it.
Tests:
- test_run_sync_runs_materialized_pass_on_keboola_only_instance —
pins BUG_0001's fix; setting bigquery.project='' must NOT skip
Keboola materialized dispatch
- test_keboola_materialize_atomic_write_on_failure — pins BUG_0003;
a mid-COPY RuntimeError leaves no .parquet AND no .parquet.tmp at
the canonical path
- test_keboola_materialize_uses_tmp_path_during_copy — documents the
atomic-write contract: COPY targets .parquet.tmp, final swap to
.parquet (no .tmp suffix on the result['path'])
- existing test_run_materialized_pass_dispatches_keboola_to_keboola_extractor
fixture updated: stack_url instead of url
Full sweep: 2505 passed, 25 skipped, 0 failed (modulo 8 pre-existing
internal_roles schema-migration failures called out in the task brief).
Diagnostic + operator-facing documentation that closes the loop on the work in this PR.
`da diagnose` (via /api/health/detailed):
- New _check_bq_billing_project() helper. When data_source.type='bigquery' and BqProjects.billing == .data, surface a yellow warning: 'BigQuery billing project equals data project'. Hint includes the YAML field path + the /admin/server-config UI shortcut. Diagnose's overall status promotes warning → degraded so the CLI echoes it.
- Non-BQ instances (Keboola-only, etc.) skip the check.
- Implementation hooks into the existing /api/health/detailed surface — no new endpoint, no CLI changes.
config/instance.yaml.example documentation:
- data_source.bigquery.billing_project: USER_PROJECT_DENIED hint, /admin/server-config UI reference
- data_source.bigquery.legacy_wrap_views: analyst-side discipline note (use `da fetch` / `da query --remote`), issue #101 history, view-heavy deployment guidance
- data_source.bigquery.max_bytes_per_materialize: cost guardrail block (NEW — wasn't documented in .example before)
- ai.base_url: provider list + UI hint
- openmetadata + desktop: 'configurable via /admin/server-config UI' headers
- corporate_memory: leading note that the schema is editable via UI
Other docs:
- CHANGELOG.md: comprehensive Unreleased section
- CLAUDE.md: schema chain → v20 + Materialized SQL connector mode + per-connector tab UI mention
- README.md: mode-first source table summary
- docs/architecture.md: per-connector tab UI mention
- cli/skills/connectors.md: bootstrap rails (parallel to #154)
- docs/superpowers/plans/2026-05-01-admin-tables-form-cleanup.md: implementation plan archive (2515 lines)
- scripts/seed_dummy_tables.py: drop is_public after #150 RBAC migration (column gone)
Tests:
- test_diagnose_billing.py — 3 cases (BQ with billing==data warns, BQ with billing!=data clean, non-BQ skips)
* feat(rbac): drop dataset_permissions + access_requests + users.role + is_public; v19 migration
BREAKING. Sjednocení datové RBAC vrstvy do per-group resource_grants modelu.
Před PR byla legacy data RBAC vrstva (dataset_permissions + is_public bypass)
de-facto neaktivní — is_public neměl API/UI/CLI surface, default true znamenal
že can_access_table vždycky bypassl. Dnes každý non-admin přístup vyžaduje
explicitní resource_grants(group, "table", id) řádek.
Schema v18 → v19 (src/db.py:_v18_to_v19_finalize):
- DROP TABLE dataset_permissions, access_requests
- DROP COLUMN users.role (NULL artifact since v13)
- DROP COLUMN table_registry.is_public
- Drops přes table-rebuild idiom (rename → create new → INSERT … SELECT
→ drop old) kvůli DuckDB ALTER DROP COLUMN limitacím na tabulkách
s historic FK constraints. INSERT picks intersection sloupců, takže
test fixtures s minimal pre-v19 schemou migrate cleanly.
Runtime:
- src/rbac.py:can_access_table → deleguje na app.auth.access.can_access
- DatasetPermissionRepository, AccessRequestRepository smazány
- AGNES_ENABLE_TABLE_GRANTS env-gate v app/resource_types.py odstraněn
(TABLE je unconditionally enabled)
API drop:
- app/api/permissions.py, app/api/access_requests.py celé soubory
- /admin/permissions web route + admin_permissions.html
- "Request Access" modal v catalog.html + locked-row UI
- ~10 if user.get("role") != "admin" checků nahrazeno (admin shortcut
je uvnitř can_access_table)
- /api/settings: drop permissions field z GET; PUT /api/settings/dataset
gate přepnut na can_access(user_id, "table", dataset, conn)
Auth:
- app/auth/jwt.py:create_access_token: drop role parametr (claim zmizí
z nově vydávaných JWT; staré tokeny zůstávají valid, claim ignored)
- app/api/users.py: drop role z CreateUserRequest / UpdateUserRequest
(admin promotion = explicit add to Admin group via memberships API)
- src/repositories/users.py: drop role z create() / update()
CLI:
- da admin set-role smazán → hard-fail s replacement command
- da admin add-user --role flag pryč
- da auth import-token --role flag pryč
- da auth whoami: drop "Role:" výpis
- cli/config.py:save_token: role parametr now optional, no longer written
(back-compat se starými token.json soubory zachována — pole se ignoruje)
Tests:
- DELETE: test_permissions.py, test_permissions_api.py, test_access_requests_api.py
- REWRITE: test_access_control.py (resource_grants flow), test_rbac.py
(can_access_table over resource_grants), test_journey_rbac.py
(drop access-request flow), test_resource_types.py (drop env-gate
tests, drop is_public from helpers), test_v2_*.py (drop role-based
user dicts in favor of id-based + Admin group membership),
test_settings_api.py (no permissions field, can_access gate)
- TRIVIAL: ~30 souborů — drop role="admin" arg z UserRepository.create
a 3rd positional role z create_access_token
- NEW: test_v18_to_v19 migration test (test_db.py),
test_can_access_table_no_implicit_public (test_rbac.py),
test_admin_set_role_returns_hardfail (test_cli_admin.py)
- OpenAPI snapshot regenerated
Docs:
- CHANGELOG: BREAKING entry pod [Unreleased]
- CLAUDE.md: schema v18 → v19
- docs/architecture.md: schema table + RBAC sekce přepsána
- docs/auth-google-oauth.md: admin promotion přes da admin break-glass
- cli/skills/security.md: kompletně přepsáno na group-based model
- docs/TODO-rbac-data-enforcement.md: smazáno (TODO splněn)
Test results: 2363 passed, 19 failed. Zbývající failures jsou pre-existing
Windows-specific issues (fcntl, charset) nesouvisející s tímto PR —
ověřeno git stash pop.
Plan: ~/.claude/plans/floofy-coalescing-parnas.md
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* chore(release): cut 0.27.0
---------
Co-authored-by: Minas Arustamyan <arustamyan.minas@gmail.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Co-authored-by: ZdenekSrotyr <zdenek.srotyr@keboola.com>
* docs(spec): #134 unify BigQuery access behind BqAccess facade
Brainstorm output for issue #134. Captures:
- root cause (incl. correction of the issue's hypothesis about commit 33a9964)
- BqAccess facade API + project resolution rules
- error contract — typed BqAccessError mapped to HTTP 502 for upstream
BQ failures, 500 for deployment/config bugs
- migration plan for v2_scan, v2_sample, RemoteQueryEngine
- test rewrite eliminating _bq_client_factory injection point
- E2E verification protocol on agnes-development as success criterion
* docs(spec): #134 revise after first review
Incorporates code-reviewer findings:
Must-fix:
- Add v2_schema (2 copies of INSTALL/LOAD/SECRET dance) to migration scope.
- Reframe v2_scan headline: missing try/except around BQ calls is the
actual cause of bare 500s, not project resolution (which 33a9964 fixed).
- List two more deferred call sites (extractor.py, register_bq_table)
with explicit rationale.
Important:
- Drop billing != data clause from cross_project_forbidden heuristic;
rely only on 'serviceusage' substring. billing != data is normal
for cross-project setup, was over-classifying.
- Split bq_bad_request into _user (400) and _server (502) variants;
add sql_origin parameter to translate_bq_error so call sites declare
whether SQL contains user input.
- Add @functools.cache to BqAccess.from_config; document tests bypass
via dependency_overrides.
- Replace monkey-patched-classmethod test pattern with
BqAccess(client_factory=...) injection at construction time. Cleaner
than today's _bq_client_factory and 1:1 migration shape.
- Keep BqProjects.data (reviewer assumed registry has source_project;
it doesn't). Multi-project explicitly listed as non-goal with note.
Nice-to-have:
- Add 'Implementation strategy' section: 2 staged commits (bug fix
alone is revertable; refactor follows).
- Extend E2E protocol to cover all three endpoints, not just /sample.
- Note removal of stale docstring at src/remote_query.py:204.
* docs(spec): #134 revision 3 — incorporates second-round review
Must-fix from second review:
- v2_schema split into two migration cases: _fetch_bq_schema translates
errors via translate_bq_error; _fetch_bq_table_options preserves its
swallow-all 'except Exception → return {}' so /schema doesn't 502 on
partition-info failures.
- RemoteQueryEngine.__init__ now resolves BqAccess lazily (in
_get_bq_client, not in __init__). Without this, ~7 DuckDB-only tests
in test_remote_query.py would suddenly fail with not_configured.
- translate_bq_error pass-through for BqAccessError is now load-bearing
(clause 1, before any Google-API branch). bq.client() raises BqAccessError
for bq_lib_missing/auth_failed; without explicit pass-through those
fall to 'unknown' and re-raise as bare 500.
- Commit 1 now emits the SAME structured response shape as commit 2 to
avoid contract churn between commits.
- BIGQUERY_PROJECT env-var precedence is BREAKING for env-only deployments
— flagged in CHANGELOG ### Changed.
Editorial:
- sql_origin renamed to bad_request_status with values 'client_error' /
'upstream_error' (clearer about what the parameter actually decides).
bq_bad_request_user/_server kinds collapsed to bq_bad_request (400)
and bq_upstream_error (502).
- CLI (cli/commands/query.py) noted as external RemoteQueryEngine caller;
unaffected because new bq_access kwarg has default None.
- Added unit/integration tests for the new contracts:
test_translate_passes_through_BqAccessError,
test_v2_scan_returns_500_on_bq_lib_missing,
test_v2_schema_returns_200_with_empty_partition_on_bq_failure,
test_resolve_succeeds_after_config_set.
- E2E protocol now covers /schema as the fourth endpoint.
- Documented functools.cache-doesn't-cache-exceptions semantics and
fixture nullcontext-doesn't-close caveat for nested sessions.
* docs(spec): #134 revision 4 — incorporates third-round review
Third reviewer verdict: 'implementation-ready with two trivial edits';
explicitly noted prior rounds did the heavy lifting.
Edits:
1. get_bq_access() module-level function instead of @classmethod
@functools.cache from_config. Removes the classmethod-cache stacking
footgun (different Python versions wrap differently) and gives FastAPI's
dependency introspection a clean function signature. Drops the
'Do not subclass BqAccess' caveat that no longer applies.
2. Commit 1 strategy explicitly: wrap _fetch_bq_sample (v2_sample),
_bq_dry_run_bytes + _run_bq_scan (v2_scan), and _fetch_bq_schema
(v2_schema strict block). Do NOT touch _fetch_bq_table_options swallow-all
in commit 1 — preserved as-is, then migrated (still preserved) in commit 2.
All three endpoints emit the same structured body shape so client parsers
see one consistent contract throughout the staged rollout. No more
half-rolled-out window where /sample is bare 500 while /scan is
structured 502.
* docs(plan): #134 implementation plan — Phase 1 (atomic bug fix) + Phase 2 (BqAccess refactor) + Phase 3 (verification)
Bite-sized TDD tasks. 3 phases, 16 tasks total:
Phase 1 (Commit 1) — atomic bug fix across all four v2 endpoints:
Tasks 1.1-1.5 wrap _fetch_bq_sample, _bq_dry_run_bytes, _run_bq_scan,
_fetch_bq_schema with structured 502/400 try/except. _fetch_bq_table_options
preserved untouched. CHANGELOG Fixed entries.
Phase 2 (Commit 2) — BqAccess facade extraction + migration:
Tasks 2.1-2.5 build connectors/bigquery/access.py bottom-up
(BqProjects, BqAccessError, translate_bq_error, default factories,
BqAccess class, get_bq_access module-level cached). Task 2.6 adds
conftest.py fixture. Tasks 2.7-2.9 migrate v2_scan, v2_sample, v2_schema
to BqAccess. Tasks 2.10-2.11 migrate RemoteQueryEngine + tests
(lazy bq_access, drop _bq_client_factory). Task 2.12 CHANGELOG
Changed BREAKING + Internal.
Phase 3 — Verification:
3.1 full pytest. 3.2 squash into two PR-shape commits. 3.3 manual
E2E on agnes-development per spec protocol → close#134.
Self-review table maps spec sections to implementing tasks; no gaps.
* fix(v2): #134 structured 502/400 on BQ errors across /scan, /scan/estimate, /sample, /schema
Wraps the BigQuery call sites in v2_scan, v2_sample, and v2_schema (strict
block only) with try/except for google.api_core exceptions, translating to
HTTPException with a structured body shape: {error, message, details}.
Fixes Pavel's report (#134) where these endpoints returned bare HTTP 500
with no body when the SA on agnes-development hit cross-project Forbidden
on serviceusage.services.use.
Also fixes /sample's missing billing_project fallback (the bug 33a9964
fixed for /scan never landed here).
Status code split:
- /scan, /scan/estimate: BadRequest -> 400 (bq_bad_request) since SQL is
user-derived from req.select/where/order_by.
- /sample, /schema: BadRequest -> 502 (bq_upstream_error) since SQL is
server-constructed from validated identifiers.
- All Forbidden -> 502 with cross_project_forbidden if 'serviceusage' in
error message (with hint pointing at data_source.bigquery.billing_project),
else bq_forbidden.
Body shape matches what the upcoming BqAccess refactor (next commit) will
produce, so client-side parsers see one consistent contract throughout
the staged rollout.
_fetch_bq_table_options preserved exactly as-is — its swallow-all-and-return-empty
contract is intentional and survives into the refactor; /schema continues to
return 200 with empty partition info when partition queries fail.
Outer wraps in scan_endpoint, scan_estimate_endpoint, sample, and schema
endpoints exist only to make the test pattern (monkeypatching whole
_fetch_* functions) work, and are tagged TODO(#134 Phase 2) for removal
once BqAccess centralizes translation.
* refactor(bq): #134 BqAccess facade — unify v2_scan, v2_sample, v2_schema, RemoteQueryEngine
Extracts the duplicated BigQuery-access pattern (project resolution +
client construction + DuckDB-extension session + Google-API error
translation) into connectors/bigquery/access.py. Migrates four
call sites to use it:
- app/api/v2_scan.py — _bq_dry_run_bytes, _run_bq_scan
- app/api/v2_sample.py — _fetch_bq_sample
- app/api/v2_schema.py — _fetch_bq_schema (strict translation),
_fetch_bq_table_options (preserves swallow-all best-effort contract)
- src/remote_query.py — RemoteQueryEngine, lazy bq_access kwarg
The new module exposes:
- BqProjects (frozen dataclass: billing + data project IDs)
- BqAccessError (typed exception with HTTP_STATUS class mapping)
- BqAccess (facade with injectable client_factory/duckdb_session_factory
for tests; defaults call the real google-cloud-bigquery + DuckDB extension)
- get_bq_access (module-level @functools.cache; FastAPI Depends target)
- translate_bq_error (Google API exception → BqAccessError mapper, with
BqAccessError pass-through, 'serviceusage'-substring heuristic for
cross_project_forbidden, and bad_request_status param distinguishing
user-derived (400) from server-constructed (502) SQL)
- _default_client_factory, _default_duckdb_session_factory
RemoteQueryEngine.__init__ no longer accepts _bq_client_factory; tests
migrate to bq_access=BqAccess(projects, client_factory=...). DuckDB-only
RemoteQueryEngine tests need no changes — bq_access defaults to None and
get_bq_access() is only invoked on first BQ call (lazy resolution).
BqAccessError raised internally is translated to RemoteQueryError(
error_type="bq_error") in _get_bq_client to preserve the engine's
existing public contract — CLI and /api/query/hybrid callers see no change.
Endpoint tests (test_v2_scan, test_v2_scan_estimate, test_v2_sample,
test_v2_schema) migrate from monkey-patching whole _fetch_* functions
to using the new bq_access fixture in tests/conftest.py — which
exercises the REAL translation path through BqAccess + translate_bq_error,
closing the test gap flagged in Task 1.1's review.
Side-effect behavior change: v2_sample's FROM clause now uses the data
project (instance.yaml data_source.bigquery.project), not the conflated
billing_project from Phase 1. Documented in CHANGELOG ### Internal.
BREAKING for deployments combining BIGQUERY_PROJECT env var with
data_source.bigquery.project in instance.yaml — env var now overrides
data project too. See CHANGELOG ### Changed.
Two known-duplicate BQ-access sites (connectors/bigquery/extractor.py,
scripts/duckdb_manager.register_bq_table) explicitly out of scope;
tracked as follow-up.
Removed stale docstring at the previous src/remote_query.py:204
that referenced scripts.duckdb_manager._create_bq_client as the default
BQ client factory (RemoteQueryEngine never actually used that function).
Test counts: tests/test_bq_access.py +27 (new), tests/test_v2_*.py +
tests/test_remote_query.py migrated to bq_access fixture (counts unchanged
or +1-2 per file). Full suite: 2086 passed, 8 pre-existing failures
(DB migration tests with unrelated internal_roles DependencyException —
not introduced by this PR).
* fix(bq_access): translate DefaultCredentialsError to BqAccessError(auth_failed)
CI on PR #138 caught: bigquery.Client(...) resolves Application Default
Credentials at construction time; without ADC (CI without SA key, dev
laptop without 'gcloud auth application-default login') it raises
google.auth.exceptions.DefaultCredentialsError synchronously.
Pre-fix _default_client_factory only caught ImportError, so DefaultCredentialsError
propagated as raw exception — and from production endpoints would surface
as bare 500 (the exact failure mode #134 sets out to fix).
Now translates to BqAccessError(kind='auth_failed', details.hint='Run
gcloud auth application-default login...'). Endpoint catch chain returns
HTTP 502 with structured body. Adds unit test
test_raises_auth_failed_on_default_credentials_error.
Third-round spec review flagged this case in passing; the fix didn't land.
CI's auth-less environment surfaced it.
* fix(bq_access): get_bq_access() returns sentinel instead of raising when not configured
Devin BUG_0001 on PR #138 review: 'get_bq_access() as FastAPI Depends
breaks all v2 endpoints for non-BigQuery instances'.
Pre-fix: get_bq_access() raised BqAccessError(not_configured) when
neither BIGQUERY_PROJECT env nor data_source.bigquery.project was set.
Because FastAPI resolves Depends() BEFORE the endpoint body runs, this
exception fires during dep-injection — the endpoint's try/except
BqAccessError clause never gets a chance to catch it. Result: every
v2 request on Keboola-only or CSV-only instances returned bare HTTP
500, even for local-source tables that never touch BigQuery.
Fix: get_bq_access() now returns a sentinel BqAccess with empty
BqProjects and factories that raise BqAccessError(not_configured)
on actual use. Construction succeeds, FastAPI's dep-injection cleanly
yields the sentinel, the endpoint runs. The local-source code path
in build_sample / build_schema / etc. never calls bq.client() or
bq.duckdb_session() (it reads parquet directly), so non-BQ tables
return 200 as before. Only when an endpoint actually tries to query
BQ (source_type == 'bigquery') does the sentinel raise — and the
endpoint's existing except BqAccessError catches it normally,
returning structured 502 with hint.
Test get_bq_access::test_raises_not_configured_when_neither_set
renamed and rewritten to test_returns_sentinel_when_neither_set:
asserts BqAccess is returned, then asserts client() and
duckdb_session() each raise BqAccessError(not_configured) on call.
Test test_does_not_cache_exceptions removed (no longer applicable)
and replaced with test_sentinel_is_cached_per_process documenting
the operator-restart-on-config-change contract.
* docs(spec+plan): #134 genericize customer-specific tokens (CLAUDE.md OSS rule)
Devin BUG_0001/0002 round 3 on PR #138: spec and plan docs contained
customer-specific deployment hostnames, deployment names, and a GCP
project ID that violated CLAUDE.md's vendor-agnostic OSS rule
('Nothing customer-specific belongs in code, configuration defaults,
comments, docs, commit messages, PR titles, or PR bodies').
Replacements:
agnes-development.groupondev.com -> <your-agnes-host>
agnes-development -> <your-dev-instance>
prj-grp-dataview-prod-1ff9 -> <your-data-project>
s1_session_landings -> <bq_table_id>
E2E verification semantics unchanged — operators still run the same
four curls + config flip + retry, just substituting their own host /
deployment name / project / table.
* fix(bq_access): hook get_bq_access.cache_clear into instance_config.reset_cache
Devin ANALYSIS_0004 on PR #138: get_bq_access is @functools.cache'd at
process level, so it captures BigQuery project IDs at first call and
ignores subsequent instance.yaml changes. Pre-Phase-2 the v2 endpoints
re-read get_value() on every request, so admin /api/admin/server-config
saves (which call instance_config.reset_cache()) hot-reloaded the BQ
project. Without this fix, my refactor silently regresses that contract
— operators editing instance.yaml via the admin UI would see no effect
on v2 endpoints until container restart.
instance_config.reset_cache() now also calls
connectors.bigquery.access.get_bq_access.cache_clear() (lazy import,
swallowed if connectors module isn't loaded — keeps instance_config
usable in isolated unit tests).
Adds test_instance_config_reset_cache_invalidates_get_bq_access as
regression guard. Updates CHANGELOG Internal entry to mention the
hot-reload contract + the not-configured sentinel behavior (round-3
fix from Devin BUG_0001 was previously only in commit message).
* fix(bq_access): surface not_configured before identifier validation + plan path genericize
Devin BUG_0001 + BUG_0002 round 5 on PR #138.
BUG_0001 (plan doc): personal filesystem path violated CLAUDE.md
vendor-agnostic rule. Replaced with '<worktree-root>' placeholder.
BUG_0002 (sentinel error path): when get_bq_access() returns the sentinel
BqAccess (BQ not configured), the empty bq.projects.data was reaching
validate_quoted_identifier first and raising ValueError -> endpoint
mapped to HTTP 400 'unsafe_identifier' instead of structured 500
'not_configured' with hint.
Each fetch helper now checks 'if not bq.projects.data: bq.client()' as
the first step, which triggers the sentinel's BqAccessError(not_configured).
Endpoint catches the typed error and returns HTTP 500 with hint pointing
at data_source.bigquery.project. Best-effort _fetch_bq_table_options
returns {} silently in this case (preserves the swallow-all contract).
* fix(bq_access): classify DuckDB-native exceptions from bigquery_query() via string match
Devin ANALYSIS on PR #138 review (latest round). The DuckDB bigquery
extension is a C++ plugin making its own HTTP calls — when BQ returns
403, it throws duckdb.IOException with the BQ error embedded as text,
not gax.Forbidden. translate_bq_error's isinstance checks would miss
these, falling to case 7 → bare 500 in production for v2_scan, v2_sample,
and v2_schema (the bigquery_query() paths).
Fix: last-resort string-match heuristic before the re-raise. 'Forbidden'
/ '403' / 'Bad Request' / '400' in the lowercased message classifies via
the same kind hierarchy. The 'serviceusage' substring still distinguishes
cross_project_forbidden from bq_forbidden. Specific enough that random
exceptions without HTTP-error keywords still re-raise.
Adds 4 unit tests covering the new heuristic + the 'don't swallow random
exceptions' invariant.
* chore(release): cut 0.22.0
PR #138 contains issue #134 user-visible behavior changes:
- BREAKING: BIGQUERY_PROJECT env var now overrides instance.yaml
data_source.bigquery.project for v2 endpoints (previously
RemoteQueryEngine billing only).
- Fixed: structured 502/400 on /api/v2/sample, /scan, /scan/estimate,
/schema when BigQuery raises Forbidden/BadRequest (was bare 500).
- Internal: BqAccess facade refactor unifying four duplicate BQ-access
call sites; instance_config.reset_cache() now invalidates BqAccess
cache too so admin server-config saves hot-reload BQ project IDs.
Bumps to 0.22.0 because PR #137 merged first and took 0.21.0.
Three new env vars wire the Google OAuth callback to a configurable Workspace prefix and route admin/everyone Workspace groups onto the seeded system rows: AGNES_GOOGLE_GROUP_PREFIX, AGNES_GROUP_ADMIN_EMAIL, AGNES_GROUP_EVERYONE_EMAIL. Login gate redirects users with no prefix-matching group to /login?error=not_in_allowed_group. BREAKING: auto-Everyone membership for new users removed. Admin UI/API are read-only on Google-managed groups. See docs/auth-groups.md.
Issue #108 Milestone 1. Adds BigQuery table registration via /admin/tables UI and `da admin register-table` CLI without hand-editing table_registry. POST /api/admin/register-table/precheck for round-trip validation. --dry-run flag on CLI. Audit-log entries on register/update/unregister. PUT /api/admin/registry/{id} now preserves registered_at (closes#130).
* fix(scheduler): HTTP marketplaces job + SCHEDULER_API_TOKEN shared secret
Two scheduler-reliability bugs surfaced after the v0.12.1 USER-agnes flip:
1. The marketplaces job called src.marketplace.sync_marketplaces() in-process
from the scheduler container, racing the app's long-lived system.duckdb
handle. DuckDB rejects cross-process writers — every cron tick 500-ed on
"Could not set lock on file ... PID 0".
2. The data-refresh + new marketplaces jobs both 401-ed on the API because
SCHEDULER_API_TOKEN was never propagated by the Terraform startup script.
The scheduler had no credential to authenticate with.
Fix:
- New POST /api/marketplaces/sync-all (admin-only) drives the nightly refresh
through the app process so it inherits the existing DB connection.
- Scheduler swaps fn->http for marketplaces; all jobs are now plain HTTP and
the scheduler is reduced to a cron clock.
- New app/auth/scheduler_token.py adds a shared-secret auth path. The
startup script generates a 256-bit secret on first boot, persists it
across reboots, and writes it to /opt/agnes/.env. Both containers source
the same .env. The app validates incoming Bearer tokens against the env
var (constant-time, length-floored) and resolves matches to a synthetic
scheduler@system.local user that's a member of the Admin system group.
Audit-log entries from the scheduler are attributed to this user.
- app/main.py seeds the synthetic user at startup so the first cron tick
has a valid actor; lazy seed in get_scheduler_user covers token rotation
before the next app restart.
Tests: 5 new in tests/test_auth_scheduler_token.py covering empty/short
secret rejection, exact-match comparison, idempotent user seeding, and
lazy provisioning. 142 marketplace + scheduler tests + 96 auth tests
remain green.
Existing VMs with .env from before this change need a one-time
re-provisioning (re-run startup-script or rotate via openssl rand);
documented in CHANGELOG.
* fix(audit): use '_all' sentinel for bulk marketplace sync — Devin review #127
Avoids the literal string 'marketplace:None' in the audit_log resource
column when the bulk sync endpoint writes its summary row.
* fix(scheduler): unblock event loop + per-job timeouts — Devin review #127
Two findings from Devin re-review on commit 5fbad15:
1. BUG: trigger_sync_all was async def, so FastAPI ran it on the asyncio
event loop. sync_marketplaces() does blocking I/O (subprocess git
clones up to GIT_TIMEOUT_SEC=300 each, threading.Lock, DuckDB writes)
and would freeze every concurrent request for the duration of a bulk
sync. Switched to plain def so FastAPI auto-routes to the thread pool.
2. ANALYSIS: scheduler used a fixed 120s httpx timeout for every POST.
Bulk marketplace sync iterates the registry under a single lock with
up to 300s per repo — easily exceeds 120s on 2-3 slow repos. The
scheduler then sees a timeout, doesn't update last_run, and re-fires
on the next 30s tick, queueing redundant work. Per-job timeout
override added to the JOBS tuple; marketplaces gets 900s (15 min),
data-refresh keeps 120s, health-check 30s.
* fix(auth): require_session_token rejects scheduler shared secret — Devin review #127
require_session_token gates /auth/tokens (PAT minting). Pre-fix it only
rejected JWTs with typ=pat — but the scheduler shared secret is an opaque
string, so verify_token() returns None, payload becomes {}, and the
PAT-claim check silently passed. A caller bearing SCHEDULER_API_TOKEN
could mint persistent PATs that survive a secret rotation.
Added explicit is_scheduler_token() check before the PAT-claim check;
new regression test in tests/test_auth_scheduler_token.py.
Devin's other note (pre-existing async def trigger_sync at marketplaces.py:392
also calls blocking sync_one) — Devin flagged it as out-of-scope for this PR
and I agree; tracking separately.
* release(0.17.0): cut + clean up CHANGELOG duplicates
Cuts 0.17.0 (minor: scheduler shared-secret auth + sync-all endpoint
plus the deploy-shape fixes that landed since the last release tag).
Bumps pyproject from 0.15.0 — also corrects the missed bump from PR #120
(v0.16.0 was tagged on GitHub and shipped as :stable, but pyproject
stayed at 0.15.0, so /api/version, /cli/latest, and `da --version` had
been under-reporting the running release).
Removes the long-form duplicate entries for 0.13.0 / 0.14.0 / 0.15.0
above [0.16.0] — the canonical short summaries (with GitHub-release
links) already exist below 0.16.0, the long forms were leftover state
from before those versions were cut and have been silently shadowed
ever since.
Adds /me/debug HTML page rendering the logged-in user's own session state — decoded JWT claims (no raw token, sha256[:12] fingerprint for log correlation), group memberships with sources and bound external_id when present, resource grants effective via those memberships, and a Refetch from Google (dry-run) button that diffs a fresh fetch_user_groups call against the cached user_group_members snapshot. Gated by AGNES_DEBUG_AUTH env var (default off → 404, route existence undetectable in production). Self-only by construction: user_id is read from the validated session, never echoes raw JWT / password hash / full PAT. Tolerates v13 + v14 schemas via information_schema check on users.external_id.
Replaces the BigQuery wrap-view pattern with a discovery + scoped-fetch toolkit driven by the analyst's Claude session. Adds /api/v2/{catalog,schema,sample,scan,scan/estimate}, da catalog/schema/describe/fetch/snapshot/disk-info CLI commands, sqlglot-backed WHERE validator, process-local quota tracker, agent rails skill (cli/skills/agnes-data-querying.md). BREAKING: BQ wrap views off by default — set data_source.bigquery.legacy_wrap_views=true for one cycle. Backward-compat field_validator on primary_key. Catalog cache now matches documented 300s TTL with RBAC fresh per request. Cuts release v0.14.0.
Adds /admin/server-config UI for editing instance.yaml from the web. Hardening: SSRF gate on data_source URLs, narrow-overlay write strategy, atomic writes, audit log with secret masking on shape changes, threading lock on read-modify-write, corrupt-overlay refusal on write side + louder log on read side, modal Promise resolution on backdrop dismiss, sentinel scrub on save (defense-in-depth client+server). Bundles Windows PowerShell wrapper from #80. Cuts release v0.13.0.
* fix(security+ops): #82#85#87 — auth hardening, API validation, deploy posture
Security and operational hardening across three issue groups:
- M23: docker-compose.override.yml → docker-compose.dev.yml (BREAKING, prod foot-gun)
- C13: Container runs as non-root user 'agnes' (USER directive in Dockerfile)
- M21: Docker resource limits (mem_limit, cpus) on app + scheduler
- M22: Caddyfile security headers (X-Frame-Options, X-Content-Type-Options, Referrer-Policy, -Server)
- M17: /api/health split into minimal (unauth) + /api/health/detailed (auth) (BREAKING)
- M26: release.yml restricts build-and-push to main + workflow_dispatch; paths-ignore for docs
- C2: table_id traversal validation on /api/data/{table_id}/download
- M4: Upload streaming (chunk-read + temp file) instead of full-buffer; /local-md hashed filename
- C5: reset_token removed from POST /api/users/{id}/reset-password response
- C8: Startup WARNING when no user has password_hash (bootstrap window visible)
- M9: Audit log on failed web form login (mirrors /auth/token endpoint)
- M10: Atomic magic-link consume via compare-and-swap (CONSUMED: marker + DuckDB conflict catch)
Also: SSRF protection on /api/admin/configure (#46), memory stats SQL aggregation (#90)
Generated with [Devin](https://cli.devin.ai/docs)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* fix(review): SSRF 169.254.x.x + IPv6 multicast; M10 marker cleanup safety
Review fixes:
- Add 169.254.0.0/16 (link-local, cloud metadata) to SSRF regex — was
missing, allowing requests to AWS/GCP/Azure metadata endpoints
- Add ff[0-9a-f]{2}: (IPv6 multicast) to SSRF regex
- M10: wrap Step 3 (CONSUMED marker cleanup) in try-except with
warning log — prevents unhandled exception if DB write fails after
successful token consumption
- Add test for 169.254.169.254 SSRF rejection
Generated with [Devin](https://cli.devin.ai/docs)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* fix(review): SSRF IPv6 bypass, CLI health endpoint, upload FD leak
Address Devin Review findings on PR #104:
1. SSRF IPv6 bypass: Replace hostname regex with DNS resolution +
ipaddress module checks. The old regex patterns like `fe80:` only
matched up to the first colon, missing real IPv6 addresses like
`fe80::1`, `fc00::1`, `ff02::1`. The new approach resolves the
hostname via getaddrinfo and checks each resulting IP against
ipaddress.is_private/is_loopback/is_link_local/is_reserved/is_multicast.
2. CLI commands broken: `da setup test-connection`, `da setup verify`,
`da diagnose`, `da status` all called /api/health expecting the old
format (status=="healthy", services dict). Now they call
/api/health/detailed for service-level checks (with graceful fallback
to the minimal endpoint when auth is not configured).
3. Temp file handle leak: _stream_to_temp returns an open
NamedTemporaryFile; callers now close it before shutil.move() to
prevent FD leaks until GC.
Also adds IPv6 SSRF test cases (loopback, link-local, unique-local,
multicast) with mocked DNS resolution for test environment independence.
Generated with [Devin](https://cli.devin.ai/docs)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* fix(review): download regex blocks hyphenated IDs; document health split
Address Devin Review round-3 findings on PR #104:
1. _SAFE_IDENTIFIER regex blocked hyphenated table IDs: The download
endpoint used the strict SQL-identifier regex which does not allow
dots or hyphens, but Keboola table IDs like in.c-crm.orders
contain both. Switched to _SAFE_QUOTED_IDENTIFIER which allows dots
and hyphens while still blocking path-traversal chars (/, .., \)
and quote/control characters. Added test for hyphenated/dotted IDs.
2. Documented health endpoint split in DEPLOYMENT.md: Added Health
checks & external monitoring section explaining both endpoints
(minimal unauth /api/health vs authenticated /api/health/detailed)
and how to wire external monitoring tools to the detailed endpoint
with a PAT.
Generated with [Devin](https://cli.devin.ai/docs)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* release(0.12.1): cut hotfix for snapshot integrity + #82/#85/#87 hardening
* fix(security): apply CAS pattern to password reset confirm (#82/M10 follow-up)
Devin review on the rebased PR flagged the asymmetry: magic-link verify
got the atomic compare-and-swap pattern in the original M10 fix, but
password reset confirm at /auth/password/reset/confirm was still using
read-validate-clear. Two concurrent POSTs with the same valid reset
token could both succeed in setting different new passwords (last-write-
wins). Lower severity than the magic-link race because the attacker
would need the reset token AND to race the legitimate user, but the
asymmetry was a polish gap.
Mirrors app/auth/providers/email.py::_consume_token CAS exactly: write
unique CONSUMED:<random> marker via UPDATE...WHERE token=old_token, then
SELECT to verify our marker won, then proceed. Only the winner clears
the marker and applies the password change.
New regression test_concurrent_reset_only_one_wins in
tests/test_password_flows.py::TestResetConfirm pins the contract: two
ThreadPoolExecutor workers + Barrier hit /reset/confirm with the same
token; exactly one gets 302 (password applied), the other gets 200 with
'Invalid or expired'. Sanity-checked against the pre-CAS code — both
POSTs got 302 (race confirmed).
---------
Co-authored-by: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
Two Devin-flagged regressions on the squashed PR #106 head:
1) PATCH /api/admin/groups/{id} blanket-rejected on system groups.
The repository guard at src/repositories/user_groups.py was already
narrowed to "rename only" by 7147bac (PR #110 follow-up), but the
endpoint at app/api/access.py:331-343 still short-circuited with
409 "System groups are immutable" for any mutation. A description-only
payload like {"description": "..."} returned 409 instead of 200 even
though the repo would have accepted it. CHANGELOG entry promised the
fix but the code didn't match.
Endpoint now mirrors the repo contract: 409 only when payload.name
is set AND differs from existing name. Same-name no-op renames are
dropped before the repo call. Description-only updates flow through.
2) Google OAuth callback wiped google_sync memberships on transient
API failure.
fetch_user_groups is fail-soft and returns [] for both "user has no
groups" and "Cloud Identity API error". The callback fed that empty
list into replace_google_sync_groups, which DELETEs all rows with
source='google_sync' for the user then INSERTs zero — silently
wiping every Workspace-synced membership on a hiccup.
Callback now skips replace_google_sync_groups when group_names is
empty and logs "preserving existing memberships". Trade-off: a user
whose Workspace groups were genuinely cleared keeps stale memberships
until the next non-empty sync. Admin-added rows (source='admin') were
already protected by source-scope and are unaffected. The previous
guard against this exact regression was test_callback_empty_groups_
does_not_overwrite_existing in tests/test_auth_providers.py — that
test class has been skipped since v12 (asserts users.groups JSON,
needs rewrite for user_group_members).
Follow-up to the RBAC v13 + marketplace work in the parent commit. Addresses
deferred Devin findings, gemini-flagged blockers, and adds three guard rails.
== Schema v14 — FK constraints on user_group_members + resource_grants ==
Adds DuckDB foreign-key constraints so cascade deletes can no longer leave
orphaned member / grant rows pointing at a deleted group_id (which were
relying on application-level cascades up to v13). Migration is RENAME →
CREATE-with-FK → INSERT → DROP, wrapped in BEGIN TRANSACTION so a partial
failure rolls back without leaving the DB at a half-applied schema.
== AGNES_ENABLE_TABLE_GRANTS feature flag (default off) ==
ResourceType.TABLE was shipped in the parent commit as listing-only — admins
can record grants but runtime enforcement still flows through legacy
dataset_permissions. To avoid the misleading-UX surface area, the chip is
hidden from /admin/access and POST /api/admin/grants returns 422 with the
env-var name in detail until the operator opts in. Existing TABLE rows in
resource_grants stay listable + deletable so cleanup is never blocked.
Helpers: is_resource_type_enabled(rt), enabled_resource_types().
== Break-glass admin CLI ==
`da admin break-glass <user>` adds the user to the Admin user_group with
source='system_seed' regardless of RBAC state. Bypasses authentication —
relies on filesystem access to ${DATA_DIR}/state/system.duckdb implying
host-level trust. Recovery path when the operator has locked themselves
out of /admin/access.
== Devin round-2 fixes (deferred on b4ec4c4) ==
- src/repositories/user_groups.py — narrow update() guard from blocking any
mutation on system groups to blocking name change only. Description edits
now pass through. Endpoint pre-check stays as defense-in-depth. Prior
behavior surfaced as a misleading 409 'Cannot rename a system group' on
description-only PATCH.
- app/api/access.py:delete_group — wrap cascade DELETEs + repo.delete in
BEGIN TRANSACTION / COMMIT / ROLLBACK. Prevents orphan rows if any
DELETE fails after the user_groups row is gone.
- app/marketplace_server/{packager,router}.py — split compute_etag_for_user()
from build_zip(); router resolves etag first and 304-shorts before any
file read or ZIP_DEFLATED. In-process cachetools.TTLCache (default 120s,
env-tunable via AGNES_MARKETPLACE_ETAG_TTL, set 0 to disable).
invalidate_etag_cache() called by sync to force re-hash on content drift.
== Tests ==
- TestTableGrantsFeatureFlag (4 cases) — endpoint exclude/include, grant
rejection/acceptance under the flag.
- test_v12_to_v13_finalize_rollback_on_failure — destructive: monkeypatches
_seed_system_groups to raise mid-transaction, asserts schema_version stays
at 12, legacy tables intact, new tables empty (rollback fired). Then
restores the real function and asserts the retry succeeds.
- test_update_system_group_description_allowed,
test_update_system_group_same_name_no_op — repo-level coverage of the
narrowed guard.
This squashes 13 commits from ma/staging plus a small docstring translation
into a single coherent unit. Three workstreams.
== RBAC v13 redesign ==
- Drops core.viewer/analyst/km_admin/admin hierarchy and the
internal_roles / group_mappings / user_role_grants / plugin_access tables.
- Replaced by user_group_members + resource_grants. Atomic v12→v13 backfill
wrapped in BEGIN/COMMIT; ROLLBACK leaves schema_version at 12 for retry.
- Two authorization primitives in app.auth.access:
require_admin — Admin-group god-mode
require_resource_access(rt, "{path}") — entity-scoped grants
Single DB lookup per request; no session cache; no implies BFS.
- /admin/access UI (single page) replaces /admin/role-mapping +
/admin/plugin-access. CLI `da admin group/grant *` replaces
`da admin role/mapping/grant-role/revoke-role/effective-roles`.
- ResourceType.TABLE listing-only — admins can record table grants,
runtime enforcement still flows through legacy dataset_permissions
(migration plan in docs/TODO-rbac-data-enforcement.md).
== Claude Code marketplace ==
- Aggregated /marketplace.zip + /marketplace.git/* (PAT-gated,
RBAC-filtered, content-addressed cache via dulwich).
- Admin god-mode dropped on the marketplace surface — admins curate
their own view via grants like everyone else.
- Bare-repo cache materializes per RBAC-filtered ETag; stale entries
not pruned in this iteration (disclaimed in git_backend.py docstring).
== #81#83#44 security/ops hardening ==
- #81 Group A — orchestrator ATTACH allow-listing (extension/url/alias).
- #81 Group B — Keboola extractor 3-state exit codes:
0 success / 1 total fail / 2 PARTIAL fail
Sync API logs PARTIAL FAILURE alert on exit 2. Operators with binary
alerting must teach it the new partial signal.
- #81 Group C — schema v10 view_ownership; rejects silent overwrite
of a prior connector's view name on collision.
- #81 Group D — extractor-side identifier validation.
- #83 — Jira webhook fail-closed when JIRA_WEBHOOK_SECRET unset
+ path-traversal fix.
- #44 — entire /api/scripts/* surface is admin-only (planted-script +
sandbox-bypass risk closed).
== Web UI polish + deploy fix ==
- /admin/access: live grant-count badges (no stale snapshot revert),
shared-header CSS link added to /catalog and /admin/{tables,permissions},
per-resource-type colored stripes.
- docker-compose.host-mount.yml: bind,rbind so dual-disk hosts don't
silently shadow sub-mounts and write state to the wrong disk.
== OSS vendor-neutralization (waves 1+2) ==
- scripts/grpn/ → scripts/ops/. Customer-specific identifiers
(project IDs, internal hostnames, dev/prod VM IPs, brand names)
replaced with placeholders across code, docs, Terraform, Caddyfile,
OAuth probe, and planning docs. Downstream infra repos that copied
scripts/grpn/agnes-tls-rotate.sh or agnes-auto-upgrade.sh must
update the path.
== Translation ==
- src/repositories/user_groups.py::ensure_system docstring translated
from Czech to English for codebase consistency.
Co-authored-by: Mina Rustamyan <mina@keboola.com>
* fix(security): gate Script-API /run on admin role (#44)
The AST + string-blocklist sandbox in `_execute_script` is defense-in-depth,
not a primary trust boundary. It does not block `vars()`, `type()`, or
`__class__.__bases__` introspection chains, and the string blocklist is
trivially evadable via concatenation/dunder encoding. Treat the role gate
as the actual barrier: only admin can run scripts.
- `POST /api/scripts/run` and `POST /api/scripts/{id}/run` now require admin.
- `POST /api/scripts/deploy` stays analyst-accessible (storing != executing).
- Existing /run tests retargeted to admin_token; added regression tests
asserting analyst → 403 on both endpoints.
- CHANGELOG: BREAKING (security) bullet under Unreleased/Changed.
Closes#44.
* fix(security): admin-gate /deploy + harden sandbox blocklist (review #92)
Reviewer of PR #92 flagged three MUST-FIXes that #44 wasn't fully closed:
1. /api/scripts/deploy still accepted analyst → planted-script attack
path (analyst plants malicious source, waits for admin to /run).
Now: /deploy also requires admin; the entire Script API is admin-only.
2. The "Minimum (same-day)" blocklist mitigations from issue #44 weren't
applied. Added the introspection-chain dunders that the issue PoC
pivots through: __subclasses__, __globals__, __class__, __base__,
__bases__, __mro__, __dict__, __code__, __builtins__. Plus `vars`
in BLOCKED_FUNCTIONS. Deliberately NOT adding __init__ /
__getattribute__ (substring match would flag every legit `def __init__`)
nor `type`/`dir` (frequent in legitimate admin scripts). Documented
the trade-off inline.
3. Tests didn't cover the actual PoC payload nor non-analyst non-admin
roles. Added test_run_pwn_payload_blocked parametrized over the issue's
own PoC + two equivalent variants (lambda+__globals__, __mro__
traversal); these stay green only as long as the dunder list does.
test_*_requires_admin tests now parametrize over (analyst, viewer,
km_admin) so all three non-admin core roles are pinned at 403.
Conftest extension: seeded_app now exposes viewer_token and
km_admin_token as siblings to admin_token / analyst_token.
CHANGELOG bullet updated to reflect /deploy gate change and new
internal regression tests. 35/35 scripts tests pass locally.
Refs review of #92.
* fix(tests): test_security TestScriptSandbox needs admin token after #44 hardening
CI failure on PR #92 caught a missed test file. tests/test_security.py
seeded only an analyst user and used the analyst token to drive sandbox
tests. After the #44 admin-gate (deploy + run both admin-only), every
sandbox test got 403 from the role gate before the AST/string check
could run, so 'blocks os.system' / 'blocks eval' / etc. all failed.
Fix: extend the fixture to also seed an admin user and return the admin
token. Sandbox tests now reach the sandbox layer; access-control tests
further down in the module continue to use the analyst that was kept
around. 41/41 test_security.py tests pass locally.
* fix(security): #92 round-3 — gate GET /api/scripts on admin role
Devin Review caught: GET /api/scripts (app/api/scripts.py:44-51) was
left on Depends(get_current_user) when the rest of the API moved to
admin-only. ScriptRepository.list_all() does SELECT * FROM script_registry
which returns ALL columns including 'source' (the full script body).
So any authenticated user (viewer / analyst / km_admin) could read
admin-deployed scripts — leak of code that may contain credentials,
business logic, or admin-only operational details.
CHANGELOG already says 'The entire Script API is now admin-only',
which was true for /deploy, /run, /{id}/run, DELETE — just not for
GET. Now consistent: every Script endpoint requires admin.
Tests:
- New parametrized test_list_scripts_requires_admin over (analyst,
viewer, km_admin) tokens — all assert 403.
- Updated test_list_scripts_empty in both test_scripts_api.py and
test_api_scripts.py to use admin_token.
79 tests pass.
Refs Devin Review of #92.
* fix: cleanup unused imports, stale docstrings, and incomplete CHANGELOG
- Remove unused imports: Path, List, get_current_user (ruff F401)
- Trim docstrings to describe current behavior, not change history
- CHANGELOG now lists GET /api/scripts among admin-gated endpoints
- Remove diff-commenting inline comments from tests
Co-Authored-By: zdenek.srotyr <zdenek.srotyr@keboola.com>
* fix: merge duplicate Changed sections into one per CLAUDE.md convention
Co-Authored-By: zdenek.srotyr <zdenek.srotyr@keboola.com>
---------
Co-authored-by: Devin AI <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* fix(security): close Jira webhook fail-open + path traversal (#83)
Two related vulnerabilities:
1. Fail-open signature check: when JIRA_WEBHOOK_SECRET was unset,
_verify_signature returned True and any unauthenticated POST to
/webhooks/jira would run the full ingest pipeline. Now fail-closed —
the handler short-circuits with 503 (operator-misconfiguration signal,
distinct from 401 wrong-signature) when the secret is missing.
2. Path traversal via attacker-controlled issue_key: webhook payloads
carry issue.key, which flowed unsanitized into save_issue (issues_dir /
"{issue_key}.json"), download_attachment (attachments_dir / issue_key),
and incremental_transform (raw_dir / "issues" / "{issue_key}.json"). A
crafted webhook with issue.key="../../etc/passwd" could write outside
the Jira data dir.
Defense-in-depth: new connectors/jira/validation.py exposes
is_valid_issue_key (whitelist regex ^[A-Z][A-Z0-9_]{0,31}-\d{1,12}$) and
safe_join_under (Path.resolve() containment check). Both are enforced at
the webhook entry point AND at every filesystem boundary in the connector.
Tests:
- New tests/test_jira_validation.py — unit tests for both helpers
(parametrized invalid keys, traversal/symlink/absolute-path cases).
- Webhook tests: test_unconfigured_secret_returns_503,
test_path_traversal_in_issue_key_rejected (parametrized over 10 bad keys),
test_valid_issue_key_accepted.
CHANGELOG: two CRITICAL Fixed bullets under Unreleased.
Closes#83.
* fix(security): close remaining #83 review findings — webhookEvent traversal, _handle_deletion guard, regex tightening
Reviewer of PR #93 flagged four MUST-FIXes:
1. _log_webhook_event used the attacker-controlled `webhookEvent` field
as a filename component without sanitization. Payload with
`webhookEvent: "../../tmp/pwn"` could escape WEBHOOK_LOG_DIR. Now:
- non-`[A-Za-z0-9_-]` runs are replaced with `_` (dot excluded so
`..` cannot survive sanitization as a directory component)
- length capped at 64 chars
- final path routed through safe_join_under
New regression test `test_webhook_event_path_traversal_sanitized`.
2. _handle_deletion (connectors/jira/service.py:530) and
process_webhook_event (line 487) still used raw issue_key in path
builds. Even though the webhook handler validates upstream, the
"defense-in-depth at every filesystem boundary" claim required these
too. Both now run is_valid_issue_key and safe_join_under guards.
3. Regex `^[A-Z][A-Z0-9_]{0,31}-\d{1,12}$` permitted underscores in
project keys. Atlassian's project-key validator does not — `A_B-1`
is rejected by Jira itself. Tightened to `[A-Z0-9]` and updated
tests: `ABC_DEF-1` is now invalid, added Cyrillic А-1 (lookalike),
CRLF, and oversize cases to the bad-key parametrization.
4. Existing test test_deletion_of_nonexistent_issue_returns_true used
`PROJ-NOEXIST` which is not a real Jira key shape. Updated to
`PROJ-99999`. The test still exercises the same intent (deletion of
issue with no local file is idempotent).
73/73 jira tests pass locally (test_jira_webhooks + test_jira_validation
+ test_jira_service + test_jira_service_full + test_jira_incremental).
CHANGELOG updated to document the regex tightening and the new
webhookEvent sanitization.
Refs review of #93.
* fix(tests): test_journey_jira tests assumed fail-open before #83 fix
CI failure on PR #93 caught two journey tests that pinned the OLD
fail-open contract:
- test_webhook_with_no_secret_configured_accepted asserted 200 when
JIRA_WEBHOOK_SECRET was unset. After the #83 fix that's a 503
(operator misconfig). Renamed to _refused and flipped the assertion.
- test_webhook_empty_payload_rejected didn't set the secret, so the
503 short-circuit fired before the empty-payload 400 could. Set
JIRA_WEBHOOK_SECRET in the patched Config so the test exercises the
intended path.
56/56 jira journey + webhook + validation tests now pass.
* fix(security): #93 round-3 — webhook fallback format + save_issue early validation
Devin Review caught two real findings:
1. Webhook handler regression: the round-2 fix extracted issue_key only
from event_data['issue']['key'], but process_webhook_event has long
supported a fallback 'issue_key' top-level field for certain Jira
event formats (e.g. delete events historically). The handler now
blocks those events with 400 before they reach the service layer.
Fix: mirror process_webhook_event's fallback in the handler — try
issue.key first, fall through to event_data.get('issue_key') when
empty. is_valid_issue_key still validates whichever source provided
the key.
2. save_issue defense-in-depth was incomplete: is_valid_issue_key ran
AFTER fetch_remote_links and fetch_sla_fields had already used the
unvalidated issue_key in HTTP URL construction
({base_url}/issue/{issue_key}/remotelink etc.). A future internal
caller invoking save_issue directly with attacker-controlled input
could trigger outbound requests with a malicious path component
(limited SSRF / URL-path manipulation against the Jira API server).
Fix: move the is_valid_issue_key check to immediately after the
null guard, before any HTTP request or filesystem op. Webhook layer
still validates upstream, this is the second layer.
66 jira tests pass.
Refs Devin Review of #93.
* fix(changelog): #93 round-4 — add BREAKING marker to fail-closed bullet
Devin Review caught: the JIRA_WEBHOOK_SECRET fail-closed change is a
behavior change for operators (response code 503 vs old 200) that
existing alerting may treat differently. Per CLAUDE.md changelog
discipline rule, operators grep for **BREAKING** before bumping the
pin. Added the marker + a short note on what action operators need
to take (set the env var if they haven't).
Refs Devin Review of #93.
* fix: #93 round-5 — null-issue crash + comment drift
Devin Review caught two findings on the round-4 commit:
1. Pre-existing crash on null issue field: a webhook payload with
{"issue": null} (rather than omitting the key) caused
event_data.get("issue", {}) to return None, then issue.get("key")
raised AttributeError → unhandled 500. Pre-existing but reachable.
Fix: 'event_data.get("issue") or {}' normalises None to {}, then
the existing fallback / validation path returns 400 cleanly.
New regression test test_null_issue_field_does_not_crash.
2. Inline comment drift: the comment at line 77 documented the allowed
character class as [A-Za-z0-9._-] (with dot) but the regex at line 27
excludes dot deliberately (so '..' cannot survive sanitization).
Fixed the comment to match.
52 jira tests pass.
Refs Devin Review of #93 round 5.
* fix: #93 round-6 — process_webhook_event also normalises null issue field
Devin Review caught: the webhook handler at app/api/jira_webhooks.py
correctly handles {"issue": null} via 'event_data.get("issue") or {}',
but process_webhook_event at connectors/jira/service.py:509 still
used the bare 'event_data.get("issue", {})' which returns None on
explicit null. Internal callers (anything that invokes
process_webhook_event without going through the HTTP handler) would
hit the same AttributeError the round-5 fix closed at the handler
layer. Same one-line fix.
32 jira tests pass.
Refs Devin Review of #93 round 5.
* fix: #93 round-7 — issue-key regex uses [0-9] not \d
Devin Review caught: Python 3's \d matches any Unicode decimal digit
(Arabic-Indic ٣, Bengali ৩, Devanagari ३, …). A key like TEST-٣ would
pass the regex even though it's not a valid Jira input. Tightened to
[0-9] (ASCII only).
Added three Unicode-digit cases to the bad-key parametrization in
test_jira_validation.py to lock in the contract.
Refs Devin Review of #93 round 6.
* fix: #93 round-8 — use \\Z anchor not $ in issue-key regex
Devin Review caught: Python's $ anchor matches before a trailing \\n,
so re.match('…$', 'TEST-1\\n') returns a match. is_valid_issue_key
returned True for CRLF-injected keys. \\Z is hard end-of-string and
closes that bypass.
Manual verification:
is_valid_issue_key('TEST-1\\n') → False (was True before fix)
is_valid_issue_key('TEST-1\\r\\n') → False
is_valid_issue_key('TEST-1') → True
Refs Devin Review of #93 round 7.
* docs: #93 round-9 — CHANGELOG regex matches implementation
* feat(auth): v9 schema — unified role management foundation (WIP)
Tasks 1-5, 10 of the role-management-complete plan. Foundation only,
follow-up commits add REST API, CLI, UI, and tests.
Schema v9:
- user_role_grants table: direct user → internal_role mapping
(complementary to group_mappings). Drives PAT/headless auth and
persists across sessions. Source field tracks 'direct' vs auto-seed.
- internal_roles.implies (JSON): transitive role hierarchy. core.admin
implies core.km_admin → core.analyst → core.viewer. Resolver does BFS
expand at lookup time.
- internal_roles.is_core (BOOL): distinguishes seeded core.* hierarchy
from module-registered roles. UI renders them differently.
- v8→v9 migration: ADD COLUMN, CREATE TABLE, _seed_core_roles +
_backfill_users_role_to_grants, then NULL legacy users.role values.
DuckDB FK constraint blocks DROP COLUMN — sloupec zůstává jako
deprecated artifact (UserRepository ignoruje), fyzický drop deferred.
Resolver:
- Regex extended to allow dotted namespace (core.admin,
context_engineering.admin), max 64 chars total.
- expand_implies(role_keys, conn): BFS over implies JSON column.
- resolve_internal_roles signature gains optional user_id parameter;
unions group-mapping resolution with user_role_grants direct grants
before implies expansion.
require_internal_role:
- Two-path resolution: session cache (OAuth) → DB grants (PAT/headless
fallback). PAT clients now legitimately satisfy gates without the
OAuth round-trip, fixing the v8 limitation where every PAT-callable
admin endpoint needed require_role(Role.ADMIN) instead of
require_internal_role(...).
Backward-compat:
- require_role(Role.X) and require_admin become thin wrappers over
require_internal_role(f"core.{role}"). Implies hierarchy preserves the
legacy "at least this level" semantics automatically — no per-level
comparison code needed.
- src/rbac.py helpers (is_admin, has_role, get_user_role,
set_user_role, can_access_table, get_accessible_tables) all read from
the resolver via _get_internal_role_keys.
- UserRepository.create() and update() now mirror role changes into
user_role_grants via _grant_core_role helper. Preserves API while
making the new table the source of truth.
- UserRepository.delete() pre-deletes user_role_grants rows
(FK cascade — DuckDB doesn't auto-cascade).
- count_admins() reads user_role_grants ⨝ internal_roles instead of the
now-NULL users.role column.
First consumer:
- app/api/admin.py module-level docstring documents the v9 pattern for
future module authors. Existing require_role(Role.ADMIN) callsites
flow through the wrapper; no behavior change for OAuth callers, and
PAT callers gain access via direct grants.
Tests: full suite green (1396 passed, 6 skipped). Existing tests
exercise the new pathway transparently because UserRepository.create
auto-grants. New test_pat_caller_with_direct_grant_passes pins the
PAT-aware contract.
Schema: v9 (was v8). pyproject.toml + CHANGELOG bump deferred to the
final PR-prep commit.
* feat(auth): role management complete — REST API + CLI + UI + docs (v0.11.4)
Sjednocuje legacy users.role enum s v8 internal-roles foundation pod jeden
model s implies hierarchií, dodává admin UI + REST API + CLI pro správu
group mappings i přímých user grants, a dělá require_internal_role
PAT-aware tak, aby admin endpointy fungovaly uniformly napříč OAuth
i headless callery.
REST API (app/api/role_management.py, +496 LOC):
- 8 endpointů pod /api/admin: internal-roles list, group-mappings CRUD,
users/{id}/role-grants CRUD, users/{id}/effective-roles debug.
- Všechny gated require_internal_role("core.admin"). Audit-log na každé
mutaci (role_mapping.created/deleted, role_grant.created/deleted).
- Last-admin protection: refuse to delete the final core.admin grant
(mirrors users.py:count_admins protection).
- Nový UserRoleGrantsRepository v src/repositories/user_role_grants.py.
CLI (cli/commands/admin.py extension, +258 LOC):
- da admin role list / show <key>
- da admin mapping list / create <group-id> <role-key> / delete <id>
- da admin grant-role <email> <role-key>
- da admin revoke-role <email> <role-key>
- da admin effective-roles <email>
- Všechno přes typer + PAT auth, --json flag, response-shape tolerantní.
UI (admin_role_mapping.html + admin_user_detail.html + nav + user list):
- Nová stránka /admin/role-mapping: internal_roles read-only table +
group_mappings table with create/delete forms.
- Nová stránka /admin/users/{id}: core role single-select + capabilities
multi-checkbox + effective-roles debug (direct + group + expanded).
- Existing user list dostává "Detail" link na novou stránku.
- Nav link na /admin/role-mapping.
Tests: +85 nových testů přes 4 nové soubory:
- test_schema_v9_migration.py (8) — fresh install + v8→v9 backfill +
legacy column NULL semantics + unknown-role fallback + invariants.
- test_api_role_management.py (33) — všech 8 endpointů, happy + error
paths, audit-log assertions, last-admin protection.
- test_cli_admin_role.py (25 + 1 conditional) — typer subcommands,
text + json output, PAT integration smoke.
- test_admin_role_mapping_ui.py (9) + test_admin_user_capabilities_ui.py (10)
— page rendering, auth gating, form contracts, JS hooks.
Full suite: 1482 passed, 6 skipped (was 1396 → +86, žádné regrese).
Docs:
- docs/internal-roles.md kompletní rewrite — odstranil "no UI yet",
přidal hierarchy diagram, dual-path resolution, dotted-namespace
convention, admin workflow přes UI/CLI/REST, refresh semantics
for group mappings vs direct grants, migration notes.
- CLAUDE.md schema v8 → v9.
- CHANGELOG.md [0.11.4] s BREAKING marker pro users.role NULL
semantics + complete Added/Changed/Removed/Internal sekce.
- pyproject.toml: 0.11.3 → 0.11.4.
Sequencing: po mergi tohoto PR Pabu rebasuje pabu/local-dev (PR #72)
na main, jeho schema migrations se posouvají z v9/v10/v11 na v10/v11/v12.
Implementation breakdown:
- Sequential (já): foundation tasks — schema v9, resolver, PAT-aware
require_internal_role, backward-compat wrappers, rbac refactor,
UserRepository auto-grant.
- Parallel sub-agents (3 worktrees, ~10 min): REST API, CLI, UI.
- Sequential (já): integrace, docs/CHANGELOG/version, schema tests,
fullsuite verification.
* fix(auth): address Devin review on PR #73 — three regressions
Three concrete bugs caught in Devin's PR review, all fixed in this commit.
1. **users.role hydration on read** (the big one):
v8→v9 migration NULLs users.role for every existing user, but a long
tail of read sites still inspect user["role"] directly:
- app/web/templates/_app_header.html:15 — admin nav gate
- app/web/templates/_app_header.html:36-37 — role badge in dropdown
- app/web/router.py:319-321 — UserInfo.is_admin/is_analyst/is_privileged
- app/web/router.py:489 — corporate memory is_km_admin
- app/api/catalog.py:54 — admin "see all tables" bypass
- app/api/sync.py:215 — admin "see all sync states" bypass
Without a fix, every existing admin loses the entire admin nav (and
API admin bypasses) immediately after upgrade — a serious regression.
Fix: new helper _hydrate_legacy_role() in app/auth/dependencies.py
maps the highest-level core.* grant back into user["role"] as the
legacy enum string. Called from get_current_user() on both auth paths
(LOCAL_DEV_MODE + JWT/PAT). Idempotent — skips when role is already
populated. Net effect: every pre-v9 callsite keeps working transparently
for both OAuth and PAT callers, with one extra DB round-trip per
authenticated request (same cost as the existing PAT-aware
require_internal_role fallback).
3 regression tests in tests/test_schema_v9_migration.py:
- test_hydration_recovers_role_from_user_role_grants
- test_hydration_returns_highest_grant (multi-grant → highest wins)
- test_hydration_falls_back_to_viewer_when_no_grants (safe fallback)
2. **CLI effective-roles TypeError**:
API returns direct/group as List[Dict] (RoleGrantResponse-shaped),
but the CLI did ', '.join(direct) which raises TypeError on dicts.
Tests masked it because mocks used bare string lists. Replaced
raw .join() with a _names() helper that extracts role_key from
each item, falling back to str() for legacy mock shapes.
3. **UI template field-name mismatch**:
admin_user_detail.html JS reads data.groups but the API serializes
the field as group (singular, per EffectiveRolesResponse pydantic).
Currently benign because the API always returns group:[], but the
field would silently disappear once the group-derived view is wired
up. Added data.group as the primary lookup, kept the legacy aliases
for shape-drift tolerance.
Full suite: 1485 passed (was 1482, +3 hydration tests), 6 skipped, no
regressions.
* fix(auth): Devin review #2 + UX self-service + RBAC docs rename
Three threads landed in one commit because they share the same
auth/role surface and CHANGELOG entry.
Devin review #73 second round (2 actionable findings):
- _hydrate_legacy_role no longer short-circuits on truthy users.role.
The role-management endpoints (POST/DELETE /api/admin/users/{id}/
role-grants + the changeCoreRole UI flow) only mutate
user_role_grants — they don't update the legacy column. The early
return trusted that stale value, so a user downgraded via the new
REST/UI kept role="admin" in their dict on subsequent requests,
which fooled _is_admin_user_dict (src/rbac.py) and the catalog/sync
admin-bypass short-circuits into retaining elevated table access
even though require_internal_role correctly denied the API gates.
Always re-resolves now, making user_role_grants the single source
of truth on every authenticated request. Cost: one DB round-trip
per request — same as the existing PAT-aware fallback. Pinned by
test_hydration_ignores_stale_legacy_role_after_grant_revoke.
- Dev-bypass (app/auth/dependencies.py) and OAuth callback
(app/auth/providers/google.py) now pass user_id to
resolve_internal_roles so direct grants land in
session["internal_roles"] alongside group-mapped roles. Pre-fix,
every admin-gated request fell through to the per-request DB
fallback inside require_internal_role and the dev-bypass log line
read "resolved 0 internal role(s)" for an obviously-admin user.
test_session_internal_roles_populated updated to assert union.
User-visible UX (also addresses local-test feedback):
- HTTP 500 on /admin/users post-v8→v9 migration — UserResponse.role
is required str, but legacy users.role was NULL-ed by the
migration. _to_response in app/api/users.py now routes every dict
through _hydrate_legacy_role; same fix lifts the silent no-op of
last-admin protection in update_user/delete_user (the role-equality
short-circuits would skip the count_admins guard for migrated
admins). Three regression tests under TestAPIUsersPostMigration.
- /profile is now a real self-service detail page for *every*
signed-in user (not just admins). Three new server-side sections:
Effective roles (resolver output as chip cloud), Direct grants
(rows in user_role_grants with source label), Roles via groups
(which Cloud Identity / dev group grants which role for the
current user). Non-admins finally see *why* a feature is or isn't
accessible. Admins additionally see a deep-link to
/admin/users/{id} for editing their own grants.
- /admin/role-mapping group-id picker. New "Known groups" panel
above the create form: clickable chips for the calling admin's
own session.google_groups (tagged "your group") merged with
external_group_ids already used in existing mappings (tagged
"already mapped"). Click a chip → fills the form. Empty-state
copy points operators at LOCAL_DEV_GROUPS / Google sign-in
instead of leaving them to guess Cloud Identity opaque IDs from
memory.
Operational fixes:
- Scheduler log-noise: every cron tick produced a
POST /auth/token 401 because the auto-fetch fallback called the
endpoint with just an email (no password) and silently fell
through. Removed the broken path entirely. Operators set
SCHEDULER_API_TOKEN (long-lived PAT) in production; in
LOCAL_DEV_MODE the dev-bypass auto-authenticates the un-tokenized
request, so jobs continue to work.
Docs:
- docs/internal-roles.md → docs/RBAC.md (git mv preserves history).
Standard industry term, more discoverable for engineers grepping
for RBAC in a new repo. Restructured: Quickstart-by-role
(operator / end-user / module author), step-by-step
Module-author workflow with code examples (register key, gate
endpoint, declare implies, write contract test), naming pitfalls,
refresh semantics. CLAUDE.md gets a new
"Extensibility → RBAC" section pointing contributors at the doc
before they add gated endpoints. Cross-refs in app/api/admin.py
+ tests/test_role_resolver.py updated.
Tests: 293 in the auth/role/scheduler/UI test set passed, 0 regressions.
* fix(auth): Devin review #3 — login flows + RBAC docs
Two new findings on commit 7d1c048, both real and addressed.
Finding 1 (BUG, HTTP 500): every auth login flow loaded users via
UserRepository.get_by_email and passed user["role"] straight to
create_access_token, Pydantic response models, and _set_login_cookie
without going through _hydrate_legacy_role. Post-v9 the legacy column
is NULL for migrated users, and TokenResponse.role is a required str —
so POST /auth/token raised ValidationError → HTTP 500 for any v8-admin
trying to log in via password. Same root cause produced non-crashing
but semantically wrong JWTs (role: null) from Google OAuth, password
web flows, and email magic-link verification.
Fix: hydrate inline in every login flow before reading user["role"]:
- app/auth/router.py — POST /auth/token (the crash site)
- app/auth/providers/google.py — OAuth callback (was just stale JWT)
- app/auth/providers/password.py — 5 flows: JSON login, web login,
JSON setup, web reset confirm, web setup confirm
- app/auth/providers/email.py — centralized in _consume_token,
covers both /verify endpoints
New regression class TestAuthLoginFlowsPostMigration pins both the
no-crash and the correct-role contracts for all four legacy levels
(viewer/analyst/km_admin/admin) on POST /auth/token.
Finding 2 (DOCS): docs/RBAC.md showed register_internal_role() being
called with implies=[...], but the function signature is (key, *,
display_name, description, owner_module). A module author copying the
example would TypeError at import time. The implies field on
internal_roles IS honored at runtime by expand_implies, but the
registry-side write path (register_internal_role + InternalRoleSpec +
sync_registered_roles_to_db) doesn't exist yet — implies is currently
seeded only for the core.* hierarchy via _seed_core_roles in src/db.py.
Rewrote the Implies hierarchy and Module-author workflow sections to
document what's actually supported in 0.11.4 and what a future change
would need to add. The "for cross-module hierarchies, register each
level + grant both" pattern works today.
Tests: 322 in the auth/role/scheduler/UI/password test set passed,
0 regressions.
* fix(db): _seed_core_roles actually runs on every connect (Devin review #4)
Devin flagged that the docstring on `_seed_core_roles` promised per-connect
execution as a safety net for accidental DELETEs and in-code seed changes,
but the only call sites lived inside `if current < SCHEMA_VERSION:` — so
once a DB was on v9 the function never ran again, and the docstring lied.
Picked option (b) from the review (actually call it on every startup) over
option (a) (fix the docstring) because the safety net is genuinely useful:
- recovery from accidental admin DELETE on internal_roles,
- in-code _CORE_ROLES_SEED tweaks (display_name/description/implies)
ship without a manual SQL deploy,
- fresh installs and migrations stop needing their own seed call sites.
Tail call gated by `get_schema_version(conn) <= SCHEMA_VERSION` so the
future-version-is-noop rollback contract still holds — a v9 binary won't
touch a DB that's been upgraded past v9.
Test coverage: new TestSeedCoreRolesSafetyNet class (3 tests) pins the
three contracts — deleted row re-seeds, mutated display_name re-syncs
from in-code seed, applied_at on schema_version doesn't churn on
already-current DBs. Existing TestMigrationSafety::test_future_version_is_noop
still passes (verified against the gating logic).
* fix(cli): versioned wheel URL in setup instructions; drop broken /cli/agnes.whl alias (#36)
* fix(cli): inline PEP 427 wheel filename in setup instructions
`uv tool install <server>/cli/agnes.whl` fails with
error: The wheel filename "agnes.whl" is invalid: Must have a version
because uv validates the filename in the URL path *before* fetching — so
the server-side Content-Disposition header (which has the real versioned
filename) is never consulted, and an HTTP redirect does not help either:
uv resolves the filename from the initial URL.
Fix the root cause by inlining the real PEP 427 filename into the setup
snippet the dashboard copies to the clipboard. The wheel filename is
resolved server-side via `_find_wheel()` and substituted into the lines
returned from `setup_instructions.resolve_lines()`, so both the read-only
HTML preview and the JS clipboard renderer get byte-identical output.
Also added `/cli/wheel/{filename}` to serve wheels at their PEP 427 path,
and kept `/cli/agnes.whl` as a 302 redirect for manual/legacy callers —
though that redirect alone is NOT sufficient for `uv tool install` (uv
validates before following redirects) and is there only as defense-in-depth.
Verified locally:
- `uv tool install <server>/cli/wheel/agnes_the_ai_analyst-2.0.0-py3-none-any.whl` succeeds
- `/install` HTML now renders the versioned URL; `/cli/agnes.whl` no longer appears in the rendered snippet
* fix(cli): remove /cli/agnes.whl alias entirely — it only confused users
The bareword alias was never actually usable:
- `uv tool install <server>/cli/agnes.whl` fails at filename validation
before any HTTP fetch, so neither the Content-Disposition header nor a
302 redirect rescued it.
- The 302-to-versioned-path fallback left a visibly "working" URL in
browser / curl -L contexts, which is exactly how the original bug got
reported in the first place ("the URL loads, why doesn't install work?").
Remove the endpoint and scrub all remaining references. The only CLI wheel
URL is now `/cli/wheel/{filename}` with the real PEP 427 filename, which
the setup-instructions template already generates server-side.
Existing tests that referenced /cli/agnes.whl become negative tests
("must not appear") so we don't regress.
* feat(cli): --version flag; sync --dry-run + progress indicator (#38)
* feat(cli): add --version / -V flag
Prints `da <version>` from package metadata (importlib.metadata). Falls
back to "unknown" when the package is not installed (e.g. running from a
source checkout without `uv pip install -e .`), instead of crashing.
Eager typer callback, so `da --version` exits before subcommand
resolution and does not require any auth/config.
* feat(cli): da sync --dry-run + X/N progress indicator
--dry-run reports what would be downloaded/uploaded without hitting the
API or writing local state. Supports the full flag set (--table, --json,
--upload-only); JSON shape is {"dry_run": true, "would_download": [...],
"summary": {...}}.
Progress bar now shows "[X/N] Downloading <table>..." with a Rich
BarColumn + TaskProgressColumn + TimeElapsedColumn instead of a bare
spinner — makes long syncs visible.
* feat(cli): durable sync + server gzip + auto-update check (#41)
* fix(sync): atomic writes + manifest hash verification + retry on transient errors
Three durability hooks around stream_download and the sync command:
1. Atomic writes. stream_download now streams into `<target>.tmp` and
calls os.replace() on success, so the real target file never exists
in a half-written state. On failure the tmp is unlinked — no cleanup
leftovers, no guard needed at read time.
2. Retry with backoff. Transient errors (ConnectError, ReadError,
WriteError, RemoteProtocolError, TimeoutException, 5xx) are retried
up to 3× with 0.3s / 1s / 3s backoff. 4xx (auth, 404) surfaces
immediately — retrying those is pointless.
3. Manifest-hash verification. After download, sync.py computes MD5 of
the target (same 8KiB chunking as app/api/sync.py:_file_hash) and
compares against `server_tables[tid]["hash"]`. Mismatch ⇒ unlink,
record error, skip state commit. The PAR1 structural check survives
as a fallback for legacy manifests without a hash.
Also makes _rebuild_duckdb_views tolerant: single broken parquet is
skipped with a stderr warning instead of killing the whole rebuild.
Supersedes #40 — this commit is a strict super-set (hash check + PAR1
fallback + atomic write + retry). #40 can be closed without merging.
* perf(server): enable GZipMiddleware for JSON / HTML responses
GZipMiddleware at minimum_size=1024 shaves bandwidth on manifest-style
JSON endpoints (/api/sync/manifest, /api/version, …) and the /install
HTML preview. Parquet file downloads are already columnar-compressed so
the middleware sees limited benefit there — but it doesn't hurt, httpx
on the client side decompresses transparently.
Placed after session middleware so gzip wraps the session-Set-Cookie
response too, and before CORSMiddleware so compression is applied to
both cross-origin and same-origin responses.
* feat(cli): auto-check for newer CLI version on startup
Server side
- GET /cli/latest returns {version, wheel_filename, download_url_path}
for whatever wheel is currently in AGNES_CLI_DIST_DIR. Public,
cacheable, no secrets — consumed by the CLI auto-update probe.
Client side
- New cli/update_check.py: reads /cli/latest with a 3s timeout, caches
the result in $DA_CONFIG_DIR/update_check.json for 24h. Cache is
invalidated when the installed version changes (e.g. after a fresh
`uv tool install`) so stale "you're behind" warnings don't linger.
- Root typer callback fires the probe before subcommand dispatch; any
failure is swallowed so a bad network never blocks a working command.
- Outdated → one-line stderr warning:
[update] da 2.0.0 is out of date — latest on this server is 2.1.0.
Upgrade: uv tool install --force <server>/cli/wheel/<…>.whl
- Disable with DA_NO_UPDATE_CHECK=1.
* fix(pr-review): None-guard the upgrade line + skip gzip on parquet paths
Two follow-ups from Devin review on #41.
1. format_outdated_notice(UpdateInfo(download_url=None)) emitted literal
"uv tool install --force None" — copy-pasting that fails. Drop the
upgrade snippet when the URL is absent and keep only the version line.
2. GZipMiddleware compressed everything over 1024 bytes, including the
parquet FileResponses served by /api/data/{tid}/download,
/cli/wheel/{name}, and /cli/download. Parquet is already columnar-
compressed — gzip there is pure CPU + latency with no size win, and
/api/data bodies can reach hundreds of MB. Wrap GZipMiddleware in a
small _SelectiveGZipMiddleware that skips those path prefixes and
delegates the rest to the stock middleware. JSON / HTML endpoints
(manifest, /install, /api/version, …) still get compressed.
* release: bump to 2.1.0 — unify AGNES_VERSION with pyproject.toml version (#42)
Before: two independent version systems. pyproject.toml carried semver
(2.0.0 → wheel filename → `da --version`) while release.yml injected
CalVer into AGNES_VERSION (e.g. 2026.04.155 → /api/version). Users saw
different strings in the CLI vs. the /install page, and the CLI auto-
update check couldn't tell "new deploy, same package version" apart
from "new package version".
Make pyproject.toml [project].version the single product-version source
of truth. release.yml extracts it and feeds AGNES_VERSION, so every
surface (/api/version, /api/health, /cli/latest, `da --version`) agrees
on one number. The CalVer tag keeps doing what CalVer is for: release
identity on the git tag and Docker image tag (versioned_tag).
Also wires AGNES_TAG through the build: release.yml → Dockerfile ARG →
env, so /api/version.image_tag finally reports the actual image tag
instead of the "unknown" fallback.
Bump to 2.1.0 to reflect the PRs shipped on ps/wheel-name-fix: durable
sync (atomic writes + manifest MD5 + retry), server GZip, CLI auto-
update probe, setup snippet PEP 427 URL.
* fix(pr-review): directional version compare in is_outdated()
UpdateInfo.is_outdated() used `self.latest != self.installed`, which
fires in both directions. If the server is rolled back or the user
connects to an older deployment, the CLI would warn "out of date"
and — worse — the formatted notice would prompt
uv tool install --force <older-version>.whl
i.e. an unintended downgrade.
Compare with packaging.version.Version (PEP 440 aware, handles pre-
release tags). Fall back to dotted-int tuple compare if packaging is
somehow missing, and return False on unparseable strings — better to
miss an upgrade hint than to silently suggest a downgrade.
Adds 4 test cases: installed older (True), installed newer (False),
10.0.0 vs 2.1.0 lexical-compare trap (correct), unparseable strings
(False).
Addresses Devin review on #43.
* fix(pr-review): read FastAPI app version from package metadata
app/main.py:80 hardcoded `version="2.0.0"` in the FastAPI constructor.
After #42 bumped pyproject.toml to 2.1.0, /api/version, /cli/latest,
and `da --version` all reported 2.1.0 while /openapi.json and the
/docs UI still advertised 2.0.0.
Read `agnes-the-ai-analyst` version via importlib.metadata (same
pattern cli/main.py:_cli_version already uses), with a `"dev"`
fallback when the package is not installed (source checkout). This
way pyproject.toml stays the single source of truth across every
version surface — /openapi.json now tracks the bump automatically.
Adds a dedicated test file to pin this behavior so a future
regression to a hardcoded literal fails at CI.
Addresses second Devin finding on #43.
* fix(pr-review): _fmt_bytes PiB label + negative cache in update_check
Two more follow-ups from Devin review on #43.
1. _fmt_bytes off-by-unit. The old loop exited at TiB but the fallback
labelled PiB, so 1 PiB rendered as "1024.0 PiB". Restructure: put
every unit inside the loop (KiB through EiB) so the division count
always matches the label. Covers up to 1 ZiB cleanly; anything
beyond renders as "<big>.0 EiB" rather than crashing.
2. Negative cache for failed /cli/latest probes. On a corporate
firewall / VPN that silently drops packets, the 3s HTTP timeout
fired on *every* `da` invocation. Writing a `latest=None` cache
entry with a 5-minute TTL caps that at one probe per 5min. Successful
probes still use the 24h TTL. Reading logic branches on whether the
cached `latest` is None.
Adds TestFmtBytes (2 cases: small/medium sizes and the PiB/EiB fallback
regression), plus two TestSync update-check cases covering negative-
cache reuse and TTL expiry.
* feat(auth): password reset & invite flows for web + admin (#34)
Wires end-to-end the previously orphaned password_reset.html and
password_setup.html templates, adds the missing POST /auth/password/reset
handler (closes#34), and restores the Reset action in the admin user UI
(which origin/main had removed precisely because the flow was broken).
Web flow
- GET /auth/password/reset — renders the set-new-password form
- POST /auth/password/reset — 'Forgot Password?' request; emails link,
anti-enumeration (same response for unknown email)
- POST /auth/password/reset/confirm — validates token + 24h TTL, sets new
password, clears token, logs user in
- GET /auth/password/setup — renders the setup form (invite link landing)
- POST /auth/password/setup/request — signup-tab 'Request Access' (email-only)
- POST /auth/password/setup/confirm — 7-day TTL, sets password + name, logs in
- Reuses LOCAL_DEV_MODE pattern from email.py: logs the link loudly so
developers can use the flow without an SMTP/SendGrid transport
Admin flow
- POST /api/users accepts send_invite → returns invite_url + invite_email_sent
- POST /api/users/{id}/reset-password now returns a full reset_url pointing
at the dedicated password-reset endpoint (NOT the magic-link verifier,
which would log the user in without prompting for a new password)
- admin_users.html: restored Reset row action, copyable reset/invite link
modals, invite checkbox on create, reworded 'magic-link not wired' notes
Backward compat
- JSON POST /auth/password/setup kept unchanged (existing tests pass)
- Active-account gate applied to reset/setup flows (matches password_login)
Tests: 21 new cases (tests/test_password_flows.py) covering GET renders,
request/confirm happy + error paths, TTLs, anti-enumeration, and admin
invite/reset URL responses. Full suite: 1309 passed.
Closes#34
* fix(admin-users): allow horizontal scroll when actions overflow
Four action buttons (Tokens, Reset, Set pwd, Delete) can exceed the
viewport on narrow screens. Switch .users-table-wrap from overflow: hidden
to overflow-x: auto so the table scrolls instead of clipping, and lock
row-actions buttons to a single nowrap line.
* fix(admin-users): override base 800px container so table can use full width
The base layout caps .container at 800px, so the table was always being
clipped regardless of viewport. Unclamp the container on this page and
widen the inner page cap to 1400px.
* fix(auth): address Devin review — harden JSON setup, anti-enumeration, preserve email case
Addresses findings from Devin review on PR #37:
1. JSON POST /auth/password/setup now enforces the same SETUP_TOKEN_TTL
(7 days) and active-account check as the web flow. An expired token or
a deactivated user can no longer bypass the gate by posting JSON.
Existing test fixture seeds setup_token_created=now so backward-compat
tests continue to pass.
2. GET /auth/password/setup no longer looks up the user to pre-fill name.
The form renders identically regardless of whether the email exists,
consistent with anti-enumeration in POST /setup/request.
3. reset_request / setup_request no longer lowercase the submitted email.
The rest of the codebase (password_login, magic-link, admin create)
uses case-sensitive lookups, so normalizing only here would silently
fail for mixed-case accounts.
Tests: 6 new cases covering expired-JSON-setup, missing-created-timestamp,
deactivated-user-rejection, mixed-case email preservation, and the
anti-enumeration property of GET /setup.
* fix: redirect unauthenticated HTML routes to /login (#10)
* docs(plan): user mgmt + PAT + CLI distribution implementation plan (#9#10#11#12)
* build(docker): produce wheel artifact for /cli/download (#9)
* feat(db): schema v5 — users.active + deactivated_at/by (#11)
* feat(api): /cli/download wheel + /cli/install.sh with baked server URL (#9)
* feat(users): repository supports active flag + count_admins (#11)
* feat(ui): /install page with per-deployment install instructions (#9)
* feat(api): user PATCH/reset-password/set-password/activate/deactivate (#11)
* fix(cli): da login prompts for password and sends it in body (#9)
* test(api): safeguard tests for self-deactivate and last admin (#11)
* feat(auth): reject requests from deactivated users (#11)
* fixup(#10): propagate next through /login buttons + lock down sanitizer tests
* feat(cli): da admin set-role/activate/deactivate/reset-password/set-password (#11)
* feat(ui): /admin/users management page (#11)
* feat(db): schema v6 — personal_access_tokens (#12)
* feat(users): access_tokens repository (#12)
* feat(auth): JWT carries typ (session|pat) and explicit jti (#12)
* feat(auth): reject revoked/expired PATs; update last_used_at (#12)
* feat(api): /auth/tokens CRUD + admin revoke; session-only guard (#12)
* feat(cli): da auth token create/list/revoke (#12)
* feat(ui): /profile page with PAT create/list/revoke (#12)
* docs: PAT usage and session/PAT TTL clarification (#12)
* feat(auth): PAT first-use-from-new-IP audit + last_used_ip (schema v7) (#12)
Closes remaining acceptance gap from issue #12: audit_log entry on first use
of a PAT from an IP that differs from the recorded last_used_ip.
- schema v7: personal_access_tokens.last_used_ip column
- AccessTokenRepository.mark_used now stores the client IP
- get_current_user extracts client IP (X-Forwarded-For first hop, fallback
to request.client.host) and emits a token.first_use_new_ip audit when the
IP changes on a subsequent use (not the very first use)
- tests: new-ip audit, same-ip no-op, first-ever-use no-op, schema v7 column
* fix: address Devin review findings on PR #28
- app/main.py: exclude /auth/* from HTML redirect handler so JSON
endpoints under /auth/ (PAT CRUD used by `da auth token` CLI) keep
their 401 JSON contract (Devin #1, bug)
- app/api/tokens.py: reject expires_in_days <= 0 explicitly; use
`is not None` so 0 no longer silently creates a non-expiring token
(Devin #2)
- app/api/users.py: validate role against Role enum in create_user
to match update_user and prevent 500 on role-protected requests
later (Devin #3)
- app/web/templates/admin_users.html: escape user-supplied strings
before innerHTML; move onclick handlers to addEventListener via
data attributes so emails with quotes / HTML no longer break the UI
or enable stored XSS (Devin #4)
- app/auth/router.py, app/auth/providers/{password,google}.py:
reject deactivated users at login instead of issuing a JWT that
would then fail on the next request — removes the confusing
redirect loop (Devin #5)
- CLAUDE.md: document schema v7 instead of stale v4 (Devin #6)
- tests/test_web_ui.py: regression test for the /auth/* JSON 401
* feat(web): add /profile and /admin/users links to dashboard nav
* feat(web): point setup banner at /install page
* chore(web): drop unused setup_instructions context
* fix: address Devin review round 2 on PR #28
- app/api/tokens.py: when expires_in_days is None (the "never" option),
use a ~100-year JWT expiry so the token doesn't silently die in 24h
via the session-default fallback in create_access_token. The real
expiry enforcement stays in verify_token's DB-level check (Devin 🔴)
- app/web/templates/profile.html: escape t.name and other user-supplied
strings via esc() helper before innerHTML, same pattern as
admin_users.html. Move revoke onclick to data-attribute +
addEventListener (Devin 🟡)
- app/api/cli_artifacts.py: use `mktemp -d` with X's at end of template
for GNU/BSD portability, place wheel inside the temp dir and
clean up with rm -rf (Devin 🚩)
* feat(web): redesign /install page; make curl one-liner primary, collapse manual
Rebuild the public /install page using the dashboard visual language
(shared header, card layout, gradient hero, design tokens from
style-custom.css). The page is now anchored on the one-liner install
path: curl -fsSL <server>/cli/install.sh | bash is rendered as the
primary, prominent step 1, while the old manual wheel-download flow
is tucked behind a closed-by-default <details> block for users in
restricted/offline environments.
Information architecture:
hero (server URL + version)
-> step 1: quick install (one-liner, big Copy button)
-> step 2: create PAT on /profile + export DA_TOKEN / da auth whoami
-> step 3: Claude Code / MCP via ~/.config/da/token.json
-> collapsed "Manual install" details for download-wheel flow
-> footer link to docs/HEADLESS_USAGE.md
Every shell snippet has a vanilla-JS "Copy" button that confirms
visually ("Copied!" for 1.5s) and falls back to textarea+execCommand
on non-secure contexts. No new dependencies, no bundler.
The route now also pulls an optional user so the header shows the
same nav (Dashboard / Profile / Logout) as dashboard.html when a
session exists, while staying fully public when signed out.
* fix(cli): use real wheel filename in install.sh (broken pip/uv install)
The installer wrote the downloaded wheel as agnes_cli.whl, which lacks a
PEP-427 version component — both pip and uv tool install reject it and
abort the one-liner.
Use curl -OJ so Content-Disposition determines the on-disk filename, then
resolve it via glob. Install an EXIT trap to remove the tmpdir even when
install fails.
* fix(web): correct manual install wheel glob and add PEP 668 / PATH hints
- Wheel glob is agnes_the_ai_analyst-*.whl (not agnes-*.whl) — the old
pattern never matched the real artefact name from the build.
- Add — or — separator between uv tool install and pip install.
- Warn that pip install --user is blocked on macOS Homebrew / modern
Debian (PEP 668) and recommend uv tool install as the default path.
- Both flows now show the ~/.local/bin PATH hint so a fresh shell can
find the da binary after install.
* fix(web): consistent session.user reference in install header
The avatar-letter fallback inside {% if session.user %} was reading
user.name / user.email directly, but the route dependency can pass
user=None — those references resolved to an empty FlexDict and produced
an empty avatar circle. Read everything through session.user to match
the guard and the dashboard pattern.
* fix(web): point headless usage link at GitHub source
/docs/HEADLESS_USAGE.md 404s — no static route serves repo docs. Point
the footer link at the rendered markdown on GitHub instead of adding a
dedicated docs serving route just for one file.
* feat(web): /install hero size, anon sign-in banner, step 2 copy polish
- Bump hero h1 from 26px to 30px to match dashboard primary scale.
- Anonymous visitors see a small sign-in banner above Step 2 (creating
a token requires auth; without the banner the flow appears stuck).
- Add an 'After generating your token' section label inside Step 2 so
the /profile CTA button no longer looks wedged mid-sentence between
adjacent paragraphs.
* chore(web): /install a11y + version pill polish
- aria-live='polite' on copy buttons so screen readers announce the
'Copied!' state change.
- Replace redundant INSTANCE_NAME eyebrow (already in the header logo)
with 'Getting started'.
- Hide the version pill when AGNES_VERSION is unset/'dev' — avoids the
misleading 'vdev' label in local/unbuilt runs.
- Manual summary focus-visible outline-offset +2px (was -2px which
clipped inside the card), and mark the chevron as decorative.
* fix(web): use session.user in dashboard avatar fallback
Inside {% if session.user %} guard, the avatar fallback referenced
(user.name or user.email). If user is None the block crashes when
the profile picture is absent. Align with the guard variable.
* fix: address Devin review round 3 on PR #28
- app/api/users.py: stop auto-sending email from reset_password. The
magic-link sender would deliver a "Login Link" that — when clicked —
consumes the reset_token via verify_magic_link and logs the user in
WITHOUT prompting for a new password. Admins now share the raw
reset_token from the API response manually, or use set-password
directly. email_sent is always False. Documented inline. (Devin 🟡)
- app/api/cli_artifacts.py: harden /cli/install.sh generation against
shell injection via Host header or AGNES_VERSION. base_url is
validated against a strict scheme+host+port regex; version against
an alnum + dot/dash/underscore allowlist. Both values are also
piped through shlex.quote() as defense in depth. (Devin 🟡)
The shared users.reset_token column between magic-link and password-
reset flows (Devin 🚩) remains an architectural gap; splitting into
separate columns needs schema v8 and is tracked for a follow-up PR.
* docs, chore(grpn): manual-deploy helpers + hackathon deploy learnings
Adds scripts/grpn/ — Makefile + agnes-auto-upgrade.sh + README for
operating Agnes on GRPN's existing foundryai-development VM when the
full Terraform flow is blocked by org policies:
- iam.disableServiceAccountKeyCreation (org constraint) forbids SA
JSON keys, so GCP_SA_KEY-based CI is unavailable
- No projectIamAdmin delegation → bootstrap-gcp.sh can't grant roles
- Secret Manager IAM bindings require setIamPolicy which editor lacks
Helper targets: deploy, deploy-tag, recreate, restart, stop, start,
status, version, logs, ps, env, ssh, tunnel, open, bootstrap-admin,
set-data-source, install-cron, uninstall-cron.
docs/superpowers/plans/2026-04-22-grpn-deploy-learnings.md — running
log of all org-policy constraints hit during the hackathon deploy,
with workarounds and derived follow-ups (WIF support, external_ip
variable, customer onboarding IAM checklist).
Not a replacement for the TF flow — stopgap until WIF lands.
* fix(web): make header logos clickable links to home
* feat(web): one-click "Setup a new Claude Code" button
Adds a single-button flow on the dashboard and /install page that
generates a fresh personal access token via POST /auth/tokens and
copies a complete, paste-ready setup script (server URL, token,
install/verify commands) to the clipboard. Falls back to a modal
textarea when the clipboard is blocked; redirects to /login on 401;
surfaces backend errors inline.
- dashboard.html: replaces the top "Set up your local environment"
anchor with a real button wired to setupNewClaude(). Removes the
duplicate bottom setup banner to keep a single entry point.
- install.html: for signed-in users, Step 1 leads with the one-click
button and demotes the curl one-liner into a collapsible "Or run
manually" aside. Anonymous visitors still see the curl flow plus a
sign-in hint.
- No new deps. Vanilla JS. Token lives in memory/clipboard only —
never rendered into persistent DOM.
* feat(cli): add "da auth import-token" for non-interactive PAT login
Writes a provided JWT into ~/.config/da/token.json using the canonical
{access_token, email, role} shape expected by save_token(). Decodes the
token locally to pull email/role claims, verifies it against the server
via GET /api/catalog/tables, and refuses to overwrite an existing token
file if the server returns 401. --email / --role overrides exist for
tokens missing those claims; --skip-verify bypasses the server round-trip
for offline / CI scenarios.
* test(cli): cover da auth import-token success + 401 + claim-fallback paths
Three new tests in TestAuthImportToken:
- valid JWT + 200 -> canonical token.json written
- 401 from /api/catalog/tables -> exit 1, existing token file untouched
- JWT without email/role claims -> refused without overrides, accepted
with --email / --role flags
* feat(web): update one-click Claude setup instructions — explicit uv install, import-token, skills question
Replaces the fragile `cat > token.json <<EOF` clipboard payload with an
explicit, auditable sequence:
1. `curl -fsSL /cli/download` + `uv tool install --force` (no opaque
`curl | bash`).
2. `da auth import-token --token ...` instead of hand-written JSON.
3. Explicit PATH persistence for zsh/bash.
4. A required question to the user about whether to copy the bundled
skills into ~/.claude/skills/agnes/ or pull them on-demand via
`da skills show`.
5. A final confirmation step with whoami + version output.
Factored both pages to include a shared partial
(app/web/templates/_claude_setup_instructions.jinja) so dashboard.html
and install.html can never drift apart again. {server_url} and {token}
stay as runtime placeholders substituted by renderSetupInstructions().
* feat(ui): modernize /admin/users + unify header nav across pages
- New shared partial app/web/templates/_app_header.html — single source
of truth for the top navigation. Used by base.html and dashboard.html
(which doesn't extend base.html). Active page highlighted via
request.url.path. Admin "Users" link gated by session.user.role.
- style-custom.css: add .app-header / .app-nav-link / .app-btn-logout /
.app-avatar styles (mirrors dashboard's previous inline copy under
app-* prefix). Mobile-friendly fallback at <720px.
- base.html: include the new partial so every page extending base
(admin_users, profile, login_email, error, …) gets the same chrome
the dashboard has.
- dashboard.html: replace its inline <header class="header"> markup
with the shared partial. Inline .header CSS left in place as
harmless dead code (separate cleanup PR).
- admin_users.html: rewritten with avatars, role pills (color-coded
per role), toggle switch for active, search/filter input, toast
notifications, modal dialogs replacing alert/confirm/prompt,
one-click copy for the reset token, empty / loading states.
All XSS-safe via the existing esc() helper + data-attribute
event delegation.
- tests/test_web_ui.py: smoke test that /admin/users renders the new
shared header chrome and the modernized markup.
* feat(api): serve CLI wheel at /cli/agnes.whl for direct uv install
uv tool install inspects the URL path suffix to recognise a wheel, so
/cli/download (which has no .whl suffix) cannot be installed directly.
Expose a stable /cli/agnes.whl alias over the same wheel lookup so users
can run: uv tool install --force https://<server>/cli/agnes.whl
* test(cli): cover da auth import-token --server persisting to config.yaml
The server persistence was already implemented in the import-token command
(save_config({server}) call) but not covered by tests. Add an explicit test
so the one-step setup contract — single import-token call writes both token
and server — cannot regress.
* feat(web): simpler Claude setup — single uv install URL, single import-token call
User feedback: the prior clipboard payload repeated the server URL and
token across multiple steps (curl + tmpfile + install + rm + separate
seed-config + import-token). Collapse to:
1. uv tool install --force {server_url}/cli/agnes.whl (single URL, direct)
2. da auth import-token --token ... --server ... (one call, persists both)
3. da auth whoami
4. skills (ask user first)
5. confirm
uv accepts HTTPS URLs that end in .whl and installs them directly, so
the tmpfile dance is unnecessary. import-token --server already persists
the server to config.yaml, so no separate printf > config.yaml step.
* fix(tests): update admin users heading assertion after template rename
The admin_users.html template now uses <h2 class="users-title">Users</h2>
instead of <h2>User management</h2>. Update the assertion to match.
* feat(ui): unify header across remaining 7 standalone pages
These 7 pages render their own full <html> and don't extend base.html,
so the previous unification commit only covered base + dashboard. Each
had its own ad-hoc <header> markup with inconsistent classes
(.top-header / .header / .page-header), inconsistent nav-link sets,
and inconsistent avatar/email styling.
Replace each inline <header>...</header> block with the shared
{% include '_app_header.html' %} so /activity-center, /admin/permissions,
/admin/tables, /catalog, /corporate-memory, /corporate-memory/admin,
and /install all show the same chrome (Dashboard / Install CLI /
Profile / Users / email + avatar / Logout) with the active page
highlighted via request.url.path.
Old inline header CSS (.header, .top-header, .page-header, .nav-link,
etc.) is left in place as harmless dead code; it can be cleaned up in
a follow-up sweep.
* feat(web): add readable preview of Claude setup payload on dashboard + /install
Move the line-by-line setup instructions into app/web/setup_instructions.py
as the single source of truth, then render them in two modes from the
existing _claude_setup_instructions.jinja partial:
- preview_mode=True → visible, read-only <pre><code> block with the real
server URL and a clearly-styled placeholder token (never a real one).
- preview_mode=False → the JS SETUP_INSTRUCTIONS_TEMPLATE used by the
one-click flow (unchanged behaviour).
Both /dashboard (env-setup-cta card) and /install (Step 1 card) now show
the preview directly under the 'Setup a new Claude Code' button so users
can see exactly what will land in their clipboard before they click.
* feat(web): update setup instructions — `da diagnose` step, explicit section titles
Rework the Claude Code setup payload to:
- Give every numbered step an unambiguous verb header ("1) Install the CLI",
"2) Log in", "3) Verify the login", "4) Run diagnostics", "5) Skills (ask
the user first)", "6) Confirm").
- Add step 4 `da diagnose` as the post-login health check. The CLI already
ships this command (cli/commands/diagnose.py); it prints "Overall:
healthy" and a list of green checks that map cleanly to next actions.
- Ask the skills copy-vs-on-demand question verbatim so Claude Code always
prompts the user the same way.
- Replace the terse "Confirm" line with a 4-bullet summary (version,
whoami, skills choice, diagnose status) so the return message is
structured and comparable across setups.
* chore(web): remove stale MCP card from /install (no MCP server today)
The 'Use with Claude Code / MCP' card (Step 3 on /install) referenced an
MCP integration Agnes does not ship. Remove the whole card. The one-click
'Setup a new Claude Code' flow in Step 1 already covers the long-lived
client use case and is less confusing than dangling persistence tips for
a non-existent integration.
* feat(api): include user_email + last_used_ip + user_id in admin tokens list response
Adds AdminTokenItem response model (superset of TokenListItem) and
AccessTokenRepository.list_all_with_user() joining personal_access_tokens
with users to denormalize user_email. Needed for /admin/tokens UI where
admins triage tokens across all users.
* feat(web): /admin/tokens page — list, filter, search, revoke across all users
Adds a new admin-only page with client-side filtering (status, user email,
last-used window), column sorting, counts bar (active/revoked/expired),
and an inline revoke action. Mirrors the /admin/users visual language.
* feat(web): add Tokens nav link for admins + deep-link from admin/users row
Admin-only nav entry to /admin/tokens, and a per-row Tokens button on
/admin/users that prefills the token page's user filter via ?user=<email>.
* test(admin): cover /admin/tokens rendering, filter state, non-admin denial, revoke
Verifies admin can render the page (title + JS hooks present), a non-admin
is blocked, unauthenticated users are redirected, the admin list response
includes user_email / user_id / last_used_ip, and admin can revoke another
user's token.
* feat(web): modern redesign of /admin/tokens — hero, stat strip, refined table, responsive cards, a11y
* feat(web): ditch the table — /admin/tokens as a card stack, modern GitHub-style list
Replaces the table-based layout with a stack of self-contained token cards
inside a <ul role=list>. Each card is a flex row: avatar + name/meta on the
left, last-used block in the middle, status pill + outlined 'Revoke' button
on the right. Status and sort controls are pill-shaped toggle chips; user
email search has an inline search icon. No <table>/<tr>/<th>/<td> anywhere.
Responsive below 720px (card stacks vertically) and 480px (stat chips 2x2).
Preserves filter IDs (flt-status, flt-user, flt-last-used) and data-revoke
for existing tests.
* feat(web): add /tokens (role-aware) — single page for both user PAT CRUD and admin overview
- Rename admin_tokens.html -> tokens.html with a new is_admin context flag.
- New route GET /tokens: renders the same card-stack UI for everyone.
* Admins: loads /auth/admin/tokens, shows owner column + stat strip, keeps
the owner-email search box and sort-by-owner chip.
* Non-admins: loads /auth/tokens (own tokens only), hides owner column +
stat chips, adds a 'New token' CTA in the hero that opens a modal
(name + expires_in_days) calling POST /auth/tokens. The raw token is
revealed once in a dismissable banner and cleared from the DOM on Hide.
- GET /admin/tokens now 302-redirects to /tokens, preserving query string
(so the /admin/users deep-link ?user=foo still works).
* feat(web): /tokens full-bleed layout to match dashboard width
The hero, toolbar, and card list used to sit inside base.html's .container
(max-width 800px). Break out with negative horizontal margins so the page
spans the viewport like /dashboard does, capped at 1440px for readability
on very wide screens with a 24px gutter on each side.
- No change to base.html itself. The override is scoped to .tokens-page.
- body { overflow-x: hidden; } guards against rare horizontal scrollbars.
- < 808px viewport: reset to natural flow (mobile already narrower).
- ≥ 1488px viewport: cap to 1440px and re-center.
* chore(web): remove /profile template + nav link (redirect /profile -> /tokens)
The old /profile PAT CRUD page is now redundant — the modern /tokens page
covers both user and admin flows. Delete the template; the router's
/profile handler already 302-redirects to /tokens.
Nav cleanup:
- Remove the 'Profile' link.
- Show a single 'Tokens' link to every signed-in user (previously only
admins saw it).
- Active-state matches /tokens, /admin/tokens, and /profile so the
highlight survives the redirect chain.
/install CTA now points at /tokens instead of /profile.
* test: cover /tokens for admin + non-admin flows, /profile redirect, nav update
tests/test_admin_tokens_ui.py
- Point admin rendering test at /tokens directly and tighten assertions
(admin-only stat strip + owner search, non-admin CTA absent).
- Add test_non_admin_can_render_tokens_page: personal body, New-token CTA,
create-modal, reveal banner; stat strip + owner search absent.
- Add test_admin_tokens_redirects_to_tokens: 302 to /tokens, query string
(?user=...) preserved for the /admin/users deep-link.
- Add test_profile_redirects_to_tokens: 302 to /tokens.
- Add test_non_admin_can_create_pat_via_tokens_page_api: exercises the
POST /auth/tokens call that the non-admin create-modal submits.
tests/test_pat.py
- test_profile_page_renders -> test_profile_page_redirects_to_tokens:
assert the 302 + that /tokens lands on the unified non-admin body.
tests/test_web_ui.py
- admin_users nav assertion: 'Tokens' link present, 'Profile' link absent.
- Add test_nav_shows_tokens_link_for_non_admin: non-admins see the same
'Tokens' link (previously only admins did).
- Add test_profile_redirects_to_tokens back-compat check.
* feat(web): collapse 'What Claude Code will receive' by default
The preview block on /dashboard and /install now uses <details>/<summary>
so it is hidden by default. Click the chevron/title to expand and review
the clipboard payload. Markup stays in the DOM so existing tests that
assert on content continue to pass.
* fix(web): /tokens width — override .container to 1280px like dashboard
The negative-margin full-bleed trick was fragile and pushed content past
the right edge on deployed viewports. Replace with a simple max-width
override of base.html's .container on this page only, matching
/dashboard's 1280px center-column layout.
* feat(web): split role-aware /tokens into my_tokens.html + admin_tokens.html
* feat(web): router — separate handlers for /tokens (own) and /admin/tokens (all)
* feat(web): nav — show Tokens for all, add All tokens for admins
* test: cover split token pages (own vs all) + admin access gating
* feat(web): move 'My tokens' into a user dropdown menu
Replaces the separate Tokens/email/Logout nav trio with a rounded
avatar trigger that opens a dropdown containing the user's email,
role, a 'My tokens' link, and Logout. Admin-only 'All tokens' stays
as a top-level nav item since it's an admin function, not a personal
one. Click-outside and Escape close the panel; chevron rotates on
open.
* fix(api): allow PATs to list/get/revoke their own tokens (CLI flow)
The documented 'da auth token list/revoke' CLI flow in
docs/HEADLESS_USAGE.md uses a PAT, but the previous dependency
(require_session_token) returned 403. Only create_token must be
session-only to prevent PAT-spawning-PAT chains; listing and
revoking your own tokens is safe with a PAT.
* fix(api): cap expires_in_days at 3650 to avoid datetime overflow (500 to 400)
Values above ~11 million days overflowed datetime.max in
datetime.now(utc) + timedelta(days=...) and surfaced as an
unhandled OverflowError → 500. Cap at 10 years with a clear
400 instead; the no-expiry code path is unaffected.
* fix(api): relax _SAFE_URL_RE to allow path prefixes, underscores, and IPv6
The previous regex rejected legitimate reverse-proxy base_url values
(https://host/agnes/), underscores in Docker Compose hostnames, and
IPv6 literals (http://[::1]:8000). Widen the charset and allow an
optional trailing path. shlex.quote continues to provide
defense-in-depth against any metacharacter that slips through.
* fix(web): /login/email and Google OAuth propagate next_path
Previously, /login/email silently dropped the ?next=<path> query
param so the hidden form field rendered empty and login always
landed on /dashboard. Google's button was hard-coded to
/auth/google/login, ignoring next entirely.
- /login page now appends ?next to the Google button URL
- /login/email reads + sanitizes next, passes as template context
- google_login stashes sanitized next_path in session['login_next']
- google_callback pops + re-sanitizes and redirects there
Sanitization factored into app/auth/_common.safe_next_path.
* fix(auth): differentiate argon2 VerifyMismatchError from internal errors in web login
The previous except (VerifyMismatchError, Exception) collapsed both
cases into the generic 'invalid credentials' redirect, silently
hiding corrupted-hash / library errors from ops. Split the two:
bad password still gets ?error=invalid; anything else logs via
logger.exception and redirects with ?err=auth_internal so ops have
a visible signal and users don't retry forever against a broken
password_hash column.
* docs: correct CLAUDE.md table name (personal_access_tokens)
v7 note referenced 'access_tokens.last_used_ip' but the real table
is personal_access_tokens (as mentioned two tokens earlier in the
same bullet). Same-file consistency fix.
* chore(web): clarify admin user-reset UI — encourage Set password over the unused reset_token
POST /api/users/{id}/reset-password stores and returns a token
but no endpoint consumes it — the magic-link sender would log the
user in without prompting for a new password, defeating the reset.
- Drop the 'Reset' row action from admin_users so admins aren't
pointed at a dead end.
- Rewrite the reveal-modal copy to tell admins to use Set password
and explicitly note that the magic-link flow isn't available
for reset tokens in this build.
The API endpoint stays for API-level future use.
* test: cover PAT CLI flow, expires_in_days overflow, proxy base_url, next propagation
- tests/test_pat.py: PAT can list own tokens (200, was 403);
PAT can revoke own tokens (204); create_token returns 400 for
expires_in_days > 3650 (was 500 via datetime overflow).
- tests/test_cli_artifacts.py: _SAFE_URL_RE accepts reverse-proxy
path prefixes, underscores, and IPv6 literals; end-to-end check
of cli_install_script with a stubbed base_url that includes
a path prefix (Agnes behind /agnes/).
- tests/test_web_ui.py: /login propagates ?next to the Google
button URL; /login/email renders next in the hidden form field
and strips hostile values; unit coverage of safe_next_path.
* fix(security): use \Z instead of $ in URL/version allowlists (trailing-\n bypass)
Python regex `$` also matches just before a trailing newline, so a Host
header or AGNES_VERSION value like "good.example.com\n$(rm -rf /)"
would slip past the allowlist. `\Z` anchors to strict end-of-string.
shlex.quote downstream remains as defense-in-depth, but the allowlist
is now the tight gate it claims to be.
* fix(auth): PAT with null expiry omits JWT exp claim (DB is the source of truth)
Previously a PAT created with `expires_in_days=null` (user-requested
"never expires") set the DB `expires_at` to NULL (correct) but still
baked a ~100y `exp` claim into the JWT. That is misleading: the PAT
silently did expire eventually, despite the UI and API promising
"no expiry".
`create_access_token` now accepts `omit_exp=True` to skip the `exp`
claim entirely. `app/api/tokens.py` passes that when `expires_in_days
is None`. The authoritative expiry check lives in
`app/auth/dependencies.py`, which reads `expires_at` from the DB row —
unchanged. PyJWT accepts claim-less JWTs indefinitely.
* test: cover trailing-newline regex bypass + no-exp JWT for unbounded PAT
- test_safe_url_re_rejects_trailing_newline_bypass: asserts both
`_SAFE_URL_RE` and `_SAFE_VERSION_RE` reject values with a trailing
`\n` (previously accepted because Python `$` matches before `\n`).
- test_pat_null_expiry_jwt_has_no_exp_claim: POST /auth/tokens with
`expires_in_days=null`, decode the returned JWT, assert `exp` is
absent while `typ=pat`, `sub`, and `jti` are still present.
- test_pat_with_null_expiry_is_accepted_by_verify_token: verify_token
round-trips a claim-less JWT without ExpiredSignatureError.
- test_pat_null_expiry_end_to_end_allows_authenticated_request: use
the null-expiry PAT against /auth/tokens and confirm it authenticates.
* docs(auth): document X-Forwarded-For trust model in _client_ip
Deployment runs behind Caddy which strips incoming X-Forwarded-For
and sets its own, so the leftmost hop is trustworthy. Clarify that
the stored last_used_ip is audit-only and never used for access
control — if the app is ever exposed directly, this value becomes
client-settable.
* docs: /profile → /tokens in install.sh next-steps, CLI error, HEADLESS_USAGE, security skill
After splitting PAT management to /tokens (with /profile as a back-compat
302), stale references remained in user-facing text. Update them to the
canonical /tokens URL so shell scripts, CLI error hints, docs, and the
bundled security skill are all consistent.
UI now shows a small footer badge with:
- release channel + CalVer version (e.g. 'stable-2026.04.47')
- floating image tag (e.g. 'stable')
- time since last container restart (proxy for 'last deployed')
Backend:
- app/api/health.py: /api/health returns image_tag, commit_sha, deployed_at
- app/api/health.py: new /api/version endpoint (lightweight, no DB hit, for
footer badge polling)
Infra:
- startup-script.sh.tpl: resolves image digest from ghcr pull, derives
channel + version from the tag name, and writes AGNES_VERSION /
RELEASE_CHANNEL / AGNES_COMMIT_SHA into .env so the app can surface them
to the UI.
UI:
- app/web/templates/base.html: footer loads /api/version asynchronously and
renders '<channel>-<version> · <tag> · deployed <relative> (<UTC>)'.
Tooltip shows full detail (commit sha, schema version).
- cli/commands/analyst.py: delete partial parquet file on download failure to unblock re-download
- cli/commands/analyst.py: escape single quotes in parquet path to prevent SQL injection
- app/api/metrics.py: replace tempfile-based import with inline YAML parse + direct repo.create(); validates name+category upfront and returns 400 if missing; removes os/tempfile imports
- CLAUDE.md: update schema version text to v4 with full migration chain
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
- Replace synchronous httpx.post() with async httpx.AsyncClient in push_metadata_to_source endpoint to avoid blocking the event loop
- Guard data["access_token"] in CLI analyst setup with .get() and a clear error message on missing key
- Add test_push_non_keboola_table_fails and test_push_keboola_table to TestMetadataAPI, covering 400/404 path and the happy path with mocked async httpx
- Validate view names with _SAFE_IDENTIFIER regex and check path traversal in _initialize_duckdb()
- find_by_table() and get_table_map() now also search the tables[] array field
- Add POST /api/admin/metrics/import endpoint for YAML file upload
- Replace generic except in _connect_to_instance() with specific HTTPStatusError/TimeoutException handlers
- Generate .claude/settings.json in _generate_claude_md() bootstrap
- Update test_find_by_table and test_get_table_map to cover tables[] array lookups
- Add test_import_metrics_yaml in TestMetricsAPI
- New app/api/metrics.py: GET /api/metrics, GET /api/metrics/{id:path},
POST /api/admin/metrics (201), DELETE /api/admin/metrics/{id:path}
- Add require_admin dependency to app/auth/dependencies.py
- Register metrics_router in app/main.py before web_router
- Deprecate GET /api/catalog/metrics/{path} with 301 redirect to new endpoint
- 7 new tests in TestMetricsAPI covering CRUD, 404, RBAC, category filter
- KeboolaClient has test_connection() not verify_token() — every
/api/admin/configure call for Keboola was failing with AttributeError
- Renamed data_source.keboola.url → stack_url to match
instance.yaml.example (line 106) and avoid user confusion
663 tests pass.
- CalVer retry loop now exits with error if all 5 attempts fail
(prevents pushing Docker image with unclaimed version tag)
- discover_tables endpoint reads data_source.keboola.url (consistent
with configure_instance and _discover_and_register_tables)
- Pre-migration snapshot flushes WAL via CHECKPOINT before copying
and copies .wal file if it still exists after flush
663 tests pass.
- _discover_and_register_tables reads from data_source.keboola.url
(matches what /api/admin/configure writes) instead of top-level
keboola.url which doesn't exist
- CalVer: claim git tag BEFORE Docker build with retry loop (up to 5
attempts). Prevents race where two concurrent CI runs get same N.
Git tag acts as a distributed lock for version uniqueness.
663 tests pass.
- Config writes to DATA_DIR/state/instance.yaml (writable) instead of
CONFIG_DIR (read-only :ro in Docker)
- instance_config.py checks DATA_DIR/state/ first, then falls back to
CONFIG_DIR for backward compat
- CalVer counter is now global across channels (*-YYYY.MM.*) per spec
- Keboola error messages sanitized — log full error, return generic msg
- chmod in secrets.py wrapped in try/except for Windows compat
- Setup wizard JS handles 401 (expired JWT) with user-facing message
- deploy.yml changed to workflow_dispatch only (no duplicate test runs)
- Smoke test uses docker-compose.prod.yml + AGNES_TAG instead of sed
- docker-compose.prod.yml uses ${AGNES_TAG:-stable} env var
663 tests pass. 8 E2E verification tests pass.
Add can_access_table check to GET /api/catalog/profile/{table_name} and
POST /api/catalog/profile/{table_name}/refresh, returning 403 for
unauthorized tables. Update test_api_complete to cover new 403 behaviour
and fix the existing 404 test to use admin token.
Add information_schema, duckdb_* introspection functions, pragma_* functions,
and relative path traversal patterns to the SQL blocklist so users cannot
enumerate schema metadata regardless of RBAC. Add six corresponding tests.
Replace copy-pasted _get_data_dir() functions in catalog.py and upload.py
with import from app.utils.get_data_dir(). sync.py and data.py already use
the shared utility.
- Add close_system_db() function in src/db.py to cleanly close shared DB connection
- Add lifespan context manager in app/main.py to trigger shutdown on app exit
- Integrate lifespan into FastAPI app initialization
- All API tests pass (77/77)
Replace substring matching with word-boundary regex in query endpoint's
table access validation. Prevents false positives where short table names
like 'id' would block any query containing the word. Uses re.escape() to
safely handle special characters in table names.
- Import re module at top
- Use regex pattern with word boundaries (\b) for matching
- Add tests to verify no false positives and proper blocking
Replace inherited env vars with a minimal env dict (PATH, DATA_DIR, HOME only),
omitting VIRTUAL_ENV and PYTHONPATH to prevent subprocess access to installed
packages. Switch subprocess invocation to sys.executable so the correct
interpreter is used with the restricted PATH. Add httpx to blocked_patterns
and BLOCKED_MODULES. Add test_sandbox_cannot_import_httpx to test_security.py.
Expand blocked keywords to cover parquet_scan, read_csv_auto, query_table,
iceberg_scan, delta_scan, call, URL schemes (http/https/s3/gcs), and
additional file-scan functions. Set enable_external_access=false on the
non-read-only analytics connection path. Add three new tests covering
parquet_scan, read_csv_auto, and query_table blocking.
Subprocess cannot open system.duckdb (main process holds lock).
Now main process reads table_registry and passes configs as JSON
via stdin to subprocess. Subprocess never touches system.duckdb.
Three-pronged fix for DuckDB lock conflicts:
1. WAL mode on system.duckdb — enables concurrent readers + writer
2. Sync trigger runs extractor as subprocess (not background task) —
separate process = separate DuckDB connections, no lock conflict
3. Both extractor and orchestrator write to .tmp then atomic rename —
avoids lock conflict with API reads on extract.duckdb/analytics.duckdb
Fixes#9 permanently.
Schema v3: add is_public column to table_registry (default true).
src/rbac.py: can_access_table() checks admin bypass, public flag,
explicit permissions, wildcard bucket permissions.
API enforcement:
- manifest: filters tables by user access
- download: 403 if no access
- catalog: filters table list
- query: validates referenced tables against allowed list
New admin permissions API (/api/admin/permissions) for grant/revoke.
28 access control tests + 733 total tests passing.
- SyncSettingsRepository + DatasetPermissionRepository with RBAC
- Script deploy/run/undeploy API with import sandboxing
- User sync settings API with permission checks
- 4 CLI skills (connectors, security, notifications, corporate-memory)
- Kamal production + staging configs
- GitHub Actions CI + deploy workflows
- 91 total tests passing
