agnes-the-ai-analyst/tests/test_orchestrator.py
ZdenekSrotyr 7781c3f331 fix(0.41.0): orphan parquet skip in filesystem fallback (CI regression)
Pre-existing test_orchestrator_skips_orphan_parquet_in_extracts caught
the regression: my filesystem fallback created master views for ANY
parquet on disk, including orphans where DELETE /api/admin/registry
removed the registry row but the parquet wasn't fully cleaned up.

Fix: load the set of registered materialized table_ids for THIS source
from table_registry before the scan, and skip any parquet whose stem
isn't in that set. If the registry read fails (test fixture, transient
DB error), skip the fallback entirely — orphan exposure is worse than
missing master view recovery.

Pre-existing test now passes. New regression test pins the orphan-skip
contract specifically for the filesystem-fallback path.
2026-05-06 17:06:20 +02:00

920 lines
36 KiB
Python

"""Tests for SyncOrchestrator."""
import os
from pathlib import Path
import duckdb
import pytest
@pytest.fixture
def setup_env(tmp_path, monkeypatch):
"""Set up DATA_DIR and return paths."""
monkeypatch.setenv("DATA_DIR", str(tmp_path))
extracts_dir = tmp_path / "extracts"
extracts_dir.mkdir()
analytics_dir = tmp_path / "analytics"
analytics_dir.mkdir()
state_dir = tmp_path / "state"
state_dir.mkdir()
yield {
"data_dir": tmp_path,
"extracts_dir": extracts_dir,
"analytics_db": str(analytics_dir / "server.duckdb"),
}
def _create_mock_extract(extracts_dir: Path, source_name: str, tables: list[dict]):
"""Create a mock extract.duckdb with _meta and views."""
source_dir = extracts_dir / source_name
source_dir.mkdir()
data_dir = source_dir / "data"
data_dir.mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute(
"""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)"""
)
for t in tables:
name = t["name"]
rows_data = t.get("data", [])
query_mode = t.get("query_mode", "local")
# Create an actual table (simulating what a view on parquet would look like)
if rows_data:
cols = ", ".join(f"{k} VARCHAR" for k in rows_data[0].keys())
conn.execute(f'CREATE TABLE "{name}" ({cols})')
for row in rows_data:
vals = ", ".join(f"'{v}'" for v in row.values())
conn.execute(f'INSERT INTO "{name}" VALUES ({vals})')
else:
conn.execute(f'CREATE TABLE "{name}" (id VARCHAR)')
row_count = len(rows_data)
conn.execute(
"INSERT INTO _meta VALUES (?, ?, ?, ?, current_timestamp, ?)",
[name, t.get("description", ""), row_count, 0, query_mode],
)
conn.close()
class TestSyncOrchestrator:
def test_rebuild_empty_extracts(self, setup_env):
from src.orchestrator import SyncOrchestrator
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert result == {}
def test_rebuild_single_source(self, setup_env):
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[
{"name": "orders", "data": [{"id": "1", "total": "100"}]},
{"name": "customers", "data": [{"id": "1", "name": "Alice"}]},
],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "keboola" in result
assert set(result["keboola"]) == {"orders", "customers"}
# Verify views work when source is attached (as the orchestrator leaves it)
# Open a fresh connection and re-attach to simulate how the analytics DB is used
conn = duckdb.connect(setup_env["analytics_db"])
try:
extract_path = setup_env["extracts_dir"] / "keboola" / "extract.duckdb"
conn.execute(f"ATTACH '{extract_path}' AS keboola (READ_ONLY)")
row = conn.execute("SELECT total FROM orders WHERE id='1'").fetchone()
assert row[0] == "100"
finally:
conn.close()
def test_rebuild_multiple_sources(self, setup_env):
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
_create_mock_extract(
setup_env["extracts_dir"],
"jira",
[{"name": "issues", "data": [{"key": "PROJ-1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "keboola" in result
assert "jira" in result
def test_rebuild_skips_missing_extract_db(self, setup_env):
from src.orchestrator import SyncOrchestrator
# Create directory without extract.duckdb
(setup_env["extracts_dir"] / "broken").mkdir()
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "broken" not in result
assert "keboola" in result
def test_rebuild_source_single(self, setup_env):
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"jira",
[{"name": "issues", "data": [{"key": "PROJ-1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
tables = orch.rebuild_source("jira")
assert "issues" in tables
def test_rebuild_source_nonexistent(self, setup_env):
from src.orchestrator import SyncOrchestrator
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
tables = orch.rebuild_source("nonexistent")
assert tables == []
def test_rebuild_with_remote_tables(self, setup_env):
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"bigquery",
[
{
"name": "page_views",
"query_mode": "remote",
"data": [{"url": "/home"}],
}
],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "bigquery" in result
assert "page_views" in result["bigquery"]
def test_rebuild_reads_remote_attach_table(self, setup_env):
"""Orchestrator reads _remote_attach and attempts to ATTACH the extension."""
from unittest.mock import patch
from src.orchestrator import SyncOrchestrator
# Create extract.duckdb with _remote_attach + a local table
source_dir = setup_env["extracts_dir"] / "keboola"
source_dir.mkdir()
(source_dir / "data").mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)""")
conn.execute("""CREATE TABLE _remote_attach (
alias VARCHAR, extension VARCHAR, url VARCHAR, token_env VARCHAR
)""")
conn.execute(
"INSERT INTO _remote_attach VALUES ('kbc', 'keboola', 'https://kbc.example.com', 'KEBOOLA_STORAGE_TOKEN')"
)
# Local table (has data, works without extension)
conn.execute('CREATE TABLE "orders" (id VARCHAR)')
conn.execute("INSERT INTO orders VALUES ('1')")
conn.execute(
"INSERT INTO _meta VALUES ('orders', '', 1, 0, current_timestamp, 'local')"
)
conn.close()
# Token env is set but extension install will fail (not available in test)
# — orchestrator should log warning and continue with local tables
with patch.dict(os.environ, {"KEBOOLA_STORAGE_TOKEN": "test-token"}):
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "keboola" in result
assert "orders" in result["keboola"]
def test_rebuild_remote_attach_skips_missing_token(self, setup_env):
"""Orchestrator skips remote ATTACH when env var is not set."""
from src.orchestrator import SyncOrchestrator
source_dir = setup_env["extracts_dir"] / "keboola"
source_dir.mkdir()
(source_dir / "data").mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)""")
conn.execute("""CREATE TABLE _remote_attach (
alias VARCHAR, extension VARCHAR, url VARCHAR, token_env VARCHAR
)""")
conn.execute(
"INSERT INTO _remote_attach VALUES ('kbc', 'keboola', 'https://kbc.example.com', 'NONEXISTENT_TOKEN_VAR')"
)
conn.execute('CREATE TABLE "orders" (id VARCHAR)')
conn.execute(
"INSERT INTO _meta VALUES ('orders', '', 0, 0, current_timestamp, 'local')"
)
conn.close()
# No token env set — remote attach should be skipped, local tables still work
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "keboola" in result
assert "orders" in result["keboola"]
def test_rebuild_source_preserves_other_sources(self, setup_env):
"""rebuild_source('jira') must not destroy views from keboola or other sources."""
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1", "total": "100"}]}],
)
_create_mock_extract(
setup_env["extracts_dir"],
"jira",
[{"name": "issues", "data": [{"key": "PROJ-1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
# Full rebuild — both sources visible
result = orch.rebuild()
assert "keboola" in result
assert "jira" in result
# Jira webhook triggers rebuild_source("jira")
tables = orch.rebuild_source("jira")
assert "issues" in tables
# Full rebuild again (simulates next scheduled run) — keboola must still be there
result2 = orch.rebuild()
assert "keboola" in result2, "keboola must survive after rebuild_source('jira')"
assert "jira" in result2
def test_rebuild_idempotent(self, setup_env):
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result1 = orch.rebuild()
result2 = orch.rebuild()
assert result1 == result2
def test_rejects_malicious_source_name(self, setup_env):
"""Directory names with SQL injection chars must be skipped entirely."""
from src.orchestrator import SyncOrchestrator
# Create a directory whose name contains SQL injection characters
malicious_name = "evil; DROP TABLE users--"
malicious_dir = setup_env["extracts_dir"] / malicious_name
malicious_dir.mkdir()
(malicious_dir / "data").mkdir()
# Create a valid extract.duckdb inside the malicious directory
db_path = malicious_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute(
"""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)"""
)
conn.execute('CREATE TABLE "orders" (id VARCHAR)')
conn.execute(
"INSERT INTO _meta VALUES ('orders', '', 0, 0, current_timestamp, 'local')"
)
conn.close()
# Also create a safe source to confirm non-malicious sources still work
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# The malicious directory must not appear in results
assert malicious_name not in result
# The safe source must still be processed
assert "keboola" in result
def test_rebuild_cleans_wal_files(self, setup_env):
"""No .wal files should remain after rebuild completes."""
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1", "total": "100"}]}],
)
analytics_db = setup_env["analytics_db"]
orch = SyncOrchestrator(analytics_db_path=analytics_db)
# Simulate a pre-existing WAL file for the target analytics DB
wal_path = Path(analytics_db + ".wal")
wal_path.write_text("stale wal")
assert wal_path.exists(), "Pre-condition: WAL file should exist before rebuild"
orch.rebuild()
# After rebuild, no WAL files should remain alongside the analytics DB
assert not wal_path.exists(), "Old WAL file must be removed during atomic swap"
# Also verify no temp WAL was left behind
tmp_wal = Path(analytics_db + ".tmp.wal")
assert not tmp_wal.exists(), "Temp WAL file must be cleaned up"
def test_rebuild_while_reading(self, setup_env):
"""Rebuild should succeed even while a read-only connection exists."""
from src.orchestrator import SyncOrchestrator
import duckdb
_create_mock_extract(
setup_env["extracts_dir"], "keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
orch.rebuild()
reader = duckdb.connect(setup_env["analytics_db"], read_only=True)
result = orch.rebuild()
assert "keboola" in result
reader.close()
def test_rejects_malicious_table_name(self, setup_env):
"""Tables with SQL injection names in _meta must be skipped; safe tables still work."""
from src.orchestrator import SyncOrchestrator
source_dir = setup_env["extracts_dir"] / "keboola"
source_dir.mkdir()
(source_dir / "data").mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute(
"""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)"""
)
# Safe table
conn.execute('CREATE TABLE "orders" (id VARCHAR)')
conn.execute("INSERT INTO orders VALUES ('1')")
conn.execute(
"INSERT INTO _meta VALUES ('orders', '', 1, 0, current_timestamp, 'local')"
)
# Malicious table_name in _meta (no actual table needed — validation rejects before access)
conn.execute(
"INSERT INTO _meta VALUES ('evil; DROP TABLE users--', '', 0, 0, current_timestamp, 'local')"
)
conn.close()
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "keboola" in result
# Safe table present
assert "orders" in result["keboola"]
# Malicious table_name must not appear
assert "evil; DROP TABLE users--" not in result["keboola"]
class TestBQMetadataAuth:
"""Orchestrator fetches a fresh metadata token for BQ remote attach."""
def test_bq_extension_triggers_metadata_token_fetch(self, setup_env, monkeypatch):
"""When _remote_attach.extension='bigquery' with empty token_env, orchestrator
calls get_metadata_token() and creates a DuckDB secret before ATTACH."""
from src.orchestrator import SyncOrchestrator
from unittest.mock import MagicMock
# Build extract.duckdb with bq _remote_attach row
source_dir = setup_env["extracts_dir"] / "bigquery"
source_dir.mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP, query_mode VARCHAR DEFAULT 'remote'
)""")
conn.execute("""CREATE TABLE _remote_attach (
alias VARCHAR, extension VARCHAR, url VARCHAR, token_env VARCHAR
)""")
conn.execute(
"INSERT INTO _remote_attach VALUES ('bq', 'bigquery', 'project=test-proj', '')"
)
# Local stub view so rebuild has something to attach (avoids INSTALL bigquery in test)
conn.execute('CREATE TABLE "stub" (x INT)')
conn.execute("INSERT INTO stub VALUES (1)")
conn.execute(
"INSERT INTO _meta VALUES ('stub', '', 1, 0, current_timestamp, 'local')"
)
conn.close()
# Stub get_metadata_token
called = {"count": 0}
def fake_token():
called["count"] += 1
return "ya29.fake-token"
monkeypatch.setattr(
"src.orchestrator.get_metadata_token",
fake_token,
)
# Capture executed SQL on the master connection. DuckDB's PyConnection has
# read-only attributes, so wrap it in a proxy instead of patching `.execute`.
captured = []
class _ConnProxy:
def __init__(self, inner):
self._inner = inner
def execute(self, sql, *args, **kwargs):
captured.append(sql)
up = sql.upper()
# Skip BQ-extension-specific calls — they need real BQ network access
# that isn't available in unit tests. Match on `TYPE bigquery`
# rather than substring "bigquery" so we don't shadow ATTACH of
# extract.duckdb files that live under /extracts/bigquery/.
if "INSTALL BIGQUERY" in up or "LOAD BIGQUERY" in up:
return MagicMock()
if "CREATE OR REPLACE SECRET" in up and "TYPE BIGQUERY" in up:
return MagicMock()
if up.startswith("ATTACH ") and "TYPE BIGQUERY" in up:
return MagicMock()
return self._inner.execute(sql, *args, **kwargs)
def __getattr__(self, name):
return getattr(self._inner, name)
real_connect = duckdb.connect
def spy_connect(path, *a, **kw):
return _ConnProxy(real_connect(path, *a, **kw))
monkeypatch.setattr("src.orchestrator.duckdb.connect", spy_connect)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
orch.rebuild()
assert called["count"] >= 1, "get_metadata_token() must be called for BQ source"
assert any(
"CREATE OR REPLACE SECRET" in s.upper() and "TYPE BIGQUERY" in s.upper()
for s in captured
), "orchestrator must create DuckDB secret with metadata token"
# ATTACH for BQ must not include TOKEN= clause (auth is via the secret)
attach_for_bq = [
s for s in captured
if s.upper().startswith("ATTACH ") and "TYPE BIGQUERY" in s.upper()
]
assert attach_for_bq, "expected ATTACH for the bq alias"
assert all("TOKEN '" not in s for s in attach_for_bq), \
f"ATTACH for BQ must not pass TOKEN= directly (auth via secret); got: {attach_for_bq}"
def test_bq_metadata_failure_logs_and_skips(self, setup_env, monkeypatch, caplog):
"""If metadata is unreachable, orchestrator logs and skips the BQ source — does not crash."""
from src.orchestrator import SyncOrchestrator
from connectors.bigquery.auth import BQMetadataAuthError
import logging
# Build minimal BQ extract with a co-located local 'stub' table
source_dir = setup_env["extracts_dir"] / "bigquery"
source_dir.mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP, query_mode VARCHAR DEFAULT 'remote'
)""")
conn.execute("""CREATE TABLE _remote_attach (
alias VARCHAR, extension VARCHAR, url VARCHAR, token_env VARCHAR
)""")
conn.execute(
"INSERT INTO _remote_attach VALUES ('bq', 'bigquery', 'project=test-proj', '')"
)
conn.execute('CREATE TABLE "stub" (x INT)')
conn.execute("INSERT INTO stub VALUES (1)")
conn.execute(
"INSERT INTO _meta VALUES ('stub', '', 1, 0, current_timestamp, 'local')"
)
conn.close()
def boom():
raise BQMetadataAuthError("metadata server unreachable: simulated")
monkeypatch.setattr("src.orchestrator.get_metadata_token", boom)
with caplog.at_level(logging.ERROR, logger="src.orchestrator"):
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# Local 'stub' view should still attach — failure of one source shouldn't break others
assert "bigquery" in result
assert "stub" in result["bigquery"]
assert any(
"metadata" in r.message.lower() and r.levelname == "ERROR"
for r in caplog.records
), f"expected ERROR-level log mentioning metadata; got: {[(r.levelname, r.message) for r in caplog.records]}"
# ---------------------------------------------------------------------------
# Orchestrator failure mode tests
# ---------------------------------------------------------------------------
class TestOrchestratorFailureModes:
"""Tests for how the orchestrator handles corrupted or partial extract.duckdb files."""
def test_corrupted_extract_duckdb_skipped_not_crashed(self, setup_env):
"""A corrupted extract.duckdb should be skipped (with a warning) and
not crash the orchestrator. Other sources should still be processed."""
from src.orchestrator import SyncOrchestrator
# Create a corrupted extract.duckdb
corrupt_dir = setup_env["extracts_dir"] / "corrupt_source"
corrupt_dir.mkdir()
db_path = corrupt_dir / "extract.duckdb"
db_path.write_bytes(b"this is not a valid duckdb file!!!")
# Also create a valid source
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# Corrupt source should not appear
assert "corrupt_source" not in result
# Valid source should still be processed
assert "keboola" in result
def test_empty_extract_duckdb_skipped(self, setup_env):
"""An extract.duckdb with _meta but no rows should be handled gracefully."""
from src.orchestrator import SyncOrchestrator
source_dir = setup_env["extracts_dir"] / "empty_source"
source_dir.mkdir()
(source_dir / "data").mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)""")
# No rows in _meta
conn.close()
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# Empty source is omitted from result (no valid tables to expose)
assert "empty_source" not in result
def test_extract_duckdb_with_only_failed_tables(self, setup_env):
"""An extract.duckdb where all tables have unsafe names should produce
no views in the analytics DB."""
from src.orchestrator import SyncOrchestrator
source_dir = setup_env["extracts_dir"] / "bad_names"
source_dir.mkdir()
(source_dir / "data").mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute("""CREATE TABLE _meta (
table_name VARCHAR, description VARCHAR, rows BIGINT,
size_bytes BIGINT, extracted_at TIMESTAMP,
query_mode VARCHAR DEFAULT 'local'
)""")
# All unsafe names
conn.execute("INSERT INTO _meta VALUES ('bad-name', '', 0, 0, current_timestamp, 'local')")
conn.execute("INSERT INTO _meta VALUES ('also bad', '', 0, 0, current_timestamp, 'local')")
conn.close()
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# Source is omitted from result (all table names failed validation)
assert "bad_names" not in result
def test_mid_write_extract_duckdb_handled_gracefully(self, setup_env):
"""If an extractor is mid-write (tmp file exists but hasn't been
swapped yet), the orchestrator should not crash."""
from src.orchestrator import SyncOrchestrator
source_dir = setup_env["extracts_dir"] / "midwrite"
source_dir.mkdir()
# Only a .tmp file — no extract.duckdb yet
tmp = source_dir / "extract.duckdb.tmp"
tmp.write_bytes(b"partial write in progress")
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# midwrite source is omitted (no extract.duckdb)
assert "midwrite" not in result
def test_multiple_corrupted_sources_do_not_block_others(self, setup_env):
"""Multiple corrupted sources should not prevent valid ones from being processed."""
from src.orchestrator import SyncOrchestrator
# Create two corrupted sources
for name in ["corrupt_a", "corrupt_b"]:
d = setup_env["extracts_dir"] / name
d.mkdir()
(d / "extract.duckdb").write_bytes(b"garbage " + name.encode())
# And a valid one
_create_mock_extract(
setup_env["extracts_dir"],
"keboola",
[{"name": "orders", "data": [{"id": "1"}]}],
)
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
assert "corrupt_a" not in result
assert "corrupt_b" not in result
assert "keboola" in result
# ----------------------------------------------------------------------------
# 0.41.0 — filesystem-fallback master views for materialized parquets that
# couldn't register themselves in extract.duckdb's _meta (the open-as-second-
# write-handle race that 0.40.0's _persist_materialized_inner_view hits).
# ----------------------------------------------------------------------------
import struct
def _write_minimal_parquet(path: Path, n_rows: int = 3) -> None:
"""Write a tiny valid parquet file using DuckDB's COPY. Used to seed
the filesystem-fallback test cases where we want a parquet on disk
that the extractor never registered in _meta."""
conn = duckdb.connect(":memory:")
try:
conn.execute(f"CREATE TABLE t AS SELECT range AS id FROM range({n_rows})")
safe = str(path).replace("'", "''")
conn.execute(f"COPY (SELECT * FROM t) TO '{safe}' (FORMAT PARQUET)")
finally:
conn.close()
def _seed_registry_materialized_row(table_id: str, source_type: str = "bigquery") -> None:
"""Insert a `query_mode='materialized'` row into table_registry so
the filesystem-fallback scan recognises the parquet as live (not
orphan from a deleted registry row).
Uses the same `get_system_db` + `TableRegistryRepository` path the
orchestrator's fallback uses internally."""
from src.db import get_system_db
from src.repositories.table_registry import TableRegistryRepository
conn = get_system_db()
try:
TableRegistryRepository(conn).register(
id=table_id,
name=table_id,
source_type=source_type,
bucket="bkt",
source_table=table_id,
source_query=f"SELECT 1 AS id",
query_mode="materialized",
)
finally:
try:
conn.close()
except Exception:
pass
class TestFilesystemFallbackMasterViews:
"""If a parquet exists on disk but never made it into _meta (the
open-handle race that bit 0.40.0), the orchestrator must still
create a master view over it via read_parquet()."""
def test_filesystem_fallback_creates_master_view(self, setup_env):
from src.orchestrator import SyncOrchestrator
# Set up an extract.duckdb with ONLY remote rows in _meta.
_create_mock_extract(
setup_env["extracts_dir"],
"bigquery",
tables=[
{"name": "remote_one", "data": [{"x": "1"}], "query_mode": "remote"},
],
)
# Drop a parquet on disk for a table that's NOT in _meta — this
# is the materialize_query "atomic swap succeeded but _meta
# registration hit lock conflict" scenario.
data_dir = setup_env["extracts_dir"] / "bigquery" / "data"
_write_minimal_parquet(data_dir / "order_economics.parquet", n_rows=42)
# Seed the matching materialized registry row — orphan parquets
# without a registry row are deliberately skipped.
_seed_registry_materialized_row("order_economics")
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# Both views should appear: the meta-path one and the
# filesystem-fallback one.
assert "bigquery" in result
assert "remote_one" in result["bigquery"]
assert "order_economics" in result["bigquery"], (
"filesystem-fallback master view must be created when parquet "
"exists on disk but _meta row is missing"
)
# Verify the master view actually queries the parquet.
master = duckdb.connect(setup_env["analytics_db"], read_only=True)
try:
n = master.execute("SELECT COUNT(*) FROM order_economics").fetchone()[0]
assert n == 42, f"master view should return parquet rows, got {n}"
finally:
master.close()
def test_filesystem_fallback_does_not_duplicate_meta_path(self, setup_env, caplog):
"""When the same name is in BOTH _meta (with an inner view) AND
on disk as a parquet, the meta path wins — filesystem fallback
must not create a second / replacement view that shadows the
meta-driven one."""
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"bigquery",
tables=[
{
"name": "order_economics",
"data": [{"x": "from_meta"}],
"query_mode": "materialized",
},
],
)
# Also drop a parquet of the same name on disk.
data_dir = setup_env["extracts_dir"] / "bigquery" / "data"
_write_minimal_parquet(data_dir / "order_economics.parquet", n_rows=99)
_seed_registry_materialized_row("order_economics")
import logging
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
with caplog.at_level(logging.INFO, logger="src.orchestrator"):
result = orch.rebuild()
# `order_economics` should appear exactly once in the result list —
# meta path won, fallback skipped because the name was already
# in the per-source `tables` set.
bq_tables = result.get("bigquery", [])
assert bq_tables.count("order_economics") == 1, (
f"name should appear exactly once, got {bq_tables}"
)
# Fallback log line must NOT have fired for this name.
fallback_lines = [
r.getMessage() for r in caplog.records
if "filesystem-fallback master view created" in r.getMessage()
and "order_economics" in r.getMessage()
]
assert fallback_lines == [], (
f"filesystem-fallback must not fire when meta path is viable; got: {fallback_lines}"
)
def test_filesystem_fallback_skips_invalid_table_id(self, setup_env, tmp_path):
"""A parquet whose stem doesn't pass identifier validation
(e.g. starts with a digit or contains spaces) must be skipped,
not crash the rebuild."""
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"bigquery",
tables=[
{"name": "remote_one", "data": [{"x": "1"}], "query_mode": "remote"},
],
)
# Identifier validator rejects names starting with a digit.
data_dir = setup_env["extracts_dir"] / "bigquery" / "data"
_write_minimal_parquet(data_dir / "9bad_name.parquet")
# Even though the registry would let it through, the identifier
# validator should still reject. (Seed registry to isolate the
# validator path from the orphan-skip path.)
try:
_seed_registry_materialized_row("9bad_name")
except Exception:
# Registry row insert may itself reject the bad id; that's
# fine — the orchestrator scan never sees it then either.
pass
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
# remote_one still works; bad-named parquet is silently skipped.
assert "remote_one" in result["bigquery"]
assert "9bad_name" not in result["bigquery"]
# Master DB has no such view.
master = duckdb.connect(setup_env["analytics_db"], read_only=True)
try:
tables = [r[0] for r in master.execute(
"SELECT table_name FROM information_schema.tables "
"WHERE table_schema='main'"
).fetchall()]
assert "9bad_name" not in tables
finally:
master.close()
def test_filesystem_fallback_skips_orphan_parquet(self, setup_env):
"""Orphan parquets — files left on disk after `DELETE
/api/admin/registry/{id}` either crashed mid-cleanup or the
operator dropped the row but the file lingers — must NOT get a
master view. Otherwise the deleted table would resurrect on next
rebuild, defeating the unregister contract.
Existing test `test_orchestrator_skips_orphan_parquet_in_extracts`
in `tests/test_admin_unregister_cleanup.py` pins this rule for the
wider unregister flow; this test pins it specifically for the
new filesystem-fallback path."""
from src.orchestrator import SyncOrchestrator
_create_mock_extract(
setup_env["extracts_dir"],
"bigquery",
tables=[
{"name": "remote_one", "data": [{"x": "1"}], "query_mode": "remote"},
],
)
# Orphan parquet — NO registry row.
data_dir = setup_env["extracts_dir"] / "bigquery" / "data"
_write_minimal_parquet(data_dir / "deleted_table.parquet")
# NOT calling _seed_registry_materialized_row here — that's the
# whole point: registry row is missing.
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
result = orch.rebuild()
bq_tables = result.get("bigquery", [])
assert "deleted_table" not in bq_tables, (
f"orphan parquet must NOT resurrect as a master view; got {bq_tables}"
)
def test_filesystem_fallback_no_data_dir_is_safe(self, setup_env):
"""Sources without a `<extract_dir>/data/` directory (e.g. the
BigQuery extractor in remote-only mode pre-#160) must not crash
the fallback scan."""
from src.orchestrator import SyncOrchestrator
# Create a source with extract.duckdb but no `data/` subdir.
source_dir = setup_env["extracts_dir"] / "bigquery"
source_dir.mkdir()
db_path = source_dir / "extract.duckdb"
conn = duckdb.connect(str(db_path))
conn.execute(
"CREATE TABLE _meta (table_name VARCHAR, description VARCHAR, "
"rows BIGINT, size_bytes BIGINT, extracted_at TIMESTAMP, "
"query_mode VARCHAR)"
)
conn.close()
orch = SyncOrchestrator(analytics_db_path=setup_env["analytics_db"])
# Must not crash.
orch.rebuild()