agnes-the-ai-analyst/tests/test_admin_unregister_cleanup.py
ZdenekSrotyr 8233c3e3f9 chore(docs): replace stale da verbs and vendor-specific install paths
Sweep operator runbooks (docs/QUICKSTART, docs/HEADLESS_USAGE,
docs/architecture, docs/sample-data, docs/agent-workspace-prompt,
docs/metrics/metrics.yml, dev_docs/server, dev_docs/disaster-recovery),
the corporate-memory service README, the jira connector README + backfill
scripts, the deploy skill, and test docstrings. Replaces `da sync` →
`agnes pull`, `da analyst setup` → `agnes init`, `da metrics ...` →
`agnes catalog --metrics` / `agnes admin metrics ...`, `da fetch` →
`agnes snapshot create`, plus the matching docker-compose admin
invocations.

Vendor-specific `/opt/data-analyst/` install paths in jira backfill /
consistency scripts and operator docs are replaced with the
placeholder `<install-dir>` and a new `AGNES_ENV_FILE` env-var override
that lets a deployment inject its actual install path without a code
change. Aligns with the OSS vendor-agnostic policy in CLAUDE.md.

CHANGELOG `### Internal` entry summarizes the audit and reaffirms the
intentional stale-marker tuples (`_LEGACY_STRINGS`, `_OUR_COMMAND_MARKERS`)
that must keep referencing `da sync` / `da fetch` / etc. for hook upgrade
and override-detection logic.
2026-05-04 21:22:19 +02:00

285 lines
9.7 KiB
Python

"""DELETE /api/admin/registry/{id} for materialized rows must remove the
materialized parquet file too — otherwise sync_state still has the row,
the manifest still serves it, and `agnes pull` keeps trying to download
data for a table that no longer has a registry entry. The orchestrator's
rebuild path additionally skips parquets that lack a matching
table_registry row, so a transient race (or operator-deleted parquet)
can't resurrect a master view for a dropped table.
E2E sub-agent finding 2026-05-01: registering a materialized BQ row,
syncing, then DELETEing the registry row left the parquet at
`/data/extracts/bigquery/data/<id>.parquet` and a master view in
`analytics.duckdb` — `/api/sync/manifest` and the master view both still
exposed the table.
"""
from __future__ import annotations
from pathlib import Path
from unittest.mock import MagicMock
import duckdb
import pytest
def _auth(token: str) -> dict:
return {"Authorization": f"Bearer {token}"}
@pytest.fixture
def bq_instance(monkeypatch):
fake_cfg = {
"data_source": {
"type": "bigquery",
"bigquery": {"project": "my-test-project", "location": "us"},
},
}
monkeypatch.setattr(
"app.instance_config.load_instance_config", lambda: fake_cfg, raising=False,
)
from app.instance_config import reset_cache
reset_cache()
yield fake_cfg
reset_cache()
@pytest.fixture
def stub_bq_extractor(monkeypatch):
"""Bypass post-register rebuild's BQ traffic so the test stays offline."""
rebuild_mock = MagicMock(return_value={
"project_id": "my-test-project",
"tables_registered": 1, "errors": [], "skipped": False,
})
monkeypatch.setattr(
"connectors.bigquery.extractor.rebuild_from_registry",
rebuild_mock,
)
monkeypatch.setattr(
"src.orchestrator.SyncOrchestrator",
lambda *a, **kw: MagicMock(),
)
return rebuild_mock
@pytest.fixture
def keboola_instance(monkeypatch):
"""Keboola instance fixture — required by tests that POST
`source_type='keboola'` payloads. The register-table source-type
availability validator refuses Keboola registrations on the default
unconfigured test instance."""
fake_cfg = {
"data_source": {
"type": "keboola",
"keboola": {
"stack_url": "https://connection.keboola.com",
"project_id": "1234",
"token_env": "KEBOOLA_STORAGE_TOKEN",
},
},
}
monkeypatch.setattr(
"app.instance_config.load_instance_config", lambda: fake_cfg, raising=False,
)
from app.instance_config import reset_cache
reset_cache()
yield fake_cfg
reset_cache()
def test_delete_materialized_bq_row_removes_parquet(
seeded_app, bq_instance, stub_bq_extractor,
):
"""DELETE on a materialized BQ registry row removes the canonical parquet
file at /data/extracts/bigquery/data/<id>.parquet so the orchestrator's
next rebuild can't resurrect a master view for the dropped row."""
c = seeded_app["client"]
token = seeded_app["admin_token"]
data_dir = seeded_app["env"]["data_dir"]
# Seed a materialized row + drop a fake parquet at the canonical path.
r = c.post(
"/api/admin/register-table",
json={
"name": "drop_me",
"source_type": "bigquery",
"query_mode": "materialized",
"source_query": 'SELECT 1 FROM bq."ds"."t"',
},
headers=_auth(token),
)
assert r.status_code == 201, r.json()
table_id = r.json()["id"]
parquet_path = data_dir / "extracts" / "bigquery" / "data" / f"{table_id}.parquet"
parquet_path.parent.mkdir(parents=True, exist_ok=True)
parquet_path.write_bytes(b"PAR1\x00fake-parquet-content")
# Also drop a stale .tmp to verify defensive cleanup.
tmp_path = parquet_path.parent / f"{table_id}.parquet.tmp"
tmp_path.write_bytes(b"PAR1\x00partial")
assert parquet_path.exists()
assert tmp_path.exists()
r2 = c.delete(f"/api/admin/registry/{table_id}", headers=_auth(token))
assert r2.status_code == 204
assert not parquet_path.exists(), "DELETE should remove the materialized parquet"
assert not tmp_path.exists(), "DELETE should also clean up stale .tmp file"
def test_delete_materialized_keboola_row_removes_parquet(seeded_app, keboola_instance):
"""Same contract for Keboola materialized rows — the canonical path is
/data/extracts/keboola/data/<id>.parquet."""
c = seeded_app["client"]
token = seeded_app["admin_token"]
data_dir = seeded_app["env"]["data_dir"]
r = c.post(
"/api/admin/register-table",
json={
"name": "kbc_drop_me",
"source_type": "keboola",
"query_mode": "materialized",
"source_query": "SELECT * FROM kbc.\"in.c-bucket\".\"events\"",
},
headers=_auth(token),
)
assert r.status_code == 201, r.json()
table_id = r.json()["id"]
parquet_path = data_dir / "extracts" / "keboola" / "data" / f"{table_id}.parquet"
parquet_path.parent.mkdir(parents=True, exist_ok=True)
parquet_path.write_bytes(b"PAR1\x00fake")
assert parquet_path.exists()
r2 = c.delete(f"/api/admin/registry/{table_id}", headers=_auth(token))
assert r2.status_code == 204
assert not parquet_path.exists()
def test_delete_remote_bq_row_does_not_touch_data_dir(
seeded_app, bq_instance, stub_bq_extractor,
):
"""DELETE on a remote-mode row (no materialized parquet exists) must not
fail and must not error out trying to delete a non-existent file."""
c = seeded_app["client"]
token = seeded_app["admin_token"]
r = c.post(
"/api/admin/register-table",
json={
"name": "remote_drop",
"source_type": "bigquery",
"bucket": "analytics",
"source_table": "orders",
"query_mode": "remote",
},
headers=_auth(token),
)
assert r.status_code in (200, 202), r.json()
table_id = r.json()["id"]
r2 = c.delete(f"/api/admin/registry/{table_id}", headers=_auth(token))
assert r2.status_code == 204
def test_delete_clears_sync_state_for_materialized_row(seeded_app, keboola_instance):
"""DELETE must also clear the sync_state row so the manifest stops
advertising the dropped table to `agnes pull`."""
c = seeded_app["client"]
token = seeded_app["admin_token"]
r = c.post(
"/api/admin/register-table",
json={
"name": "manifest_drop",
"source_type": "keboola",
"query_mode": "materialized",
"source_query": "SELECT 1",
},
headers=_auth(token),
)
assert r.status_code == 201, r.json()
table_id = r.json()["id"]
# Seed a sync_state row as if it had been materialized.
from src.db import get_system_db
from src.repositories.sync_state import SyncStateRepository
sys_conn = get_system_db()
try:
SyncStateRepository(sys_conn).update_sync(
table_id="manifest_drop", # = registry.name
rows=10, file_size_bytes=1024, hash="abc",
)
assert SyncStateRepository(sys_conn).get_table_state("manifest_drop") is not None
finally:
sys_conn.close()
r2 = c.delete(f"/api/admin/registry/{table_id}", headers=_auth(token))
assert r2.status_code == 204
sys_conn = get_system_db()
try:
st = SyncStateRepository(sys_conn).get_table_state("manifest_drop")
finally:
sys_conn.close()
assert st is None, "sync_state row should be removed by DELETE"
# --- Orchestrator skips orphan parquets without matching registry rows -------
def test_orchestrator_skips_orphan_parquet_in_extracts(e2e_env, monkeypatch):
"""A parquet at /data/extracts/<source>/data/<id>.parquet whose stem
has no matching `table_registry.name` row must NOT have a master view
created at rebuild time. Defensive — the DELETE handler removes the
parquet at unregister time, but a transient race (or manual cleanup
in flight) shouldn't leave the orchestrator exposing a dropped table.
"""
from src.db import get_system_db
from src.orchestrator import SyncOrchestrator
from src.repositories.table_registry import TableRegistryRepository
from tests.conftest import create_mock_extract
extracts_dir = e2e_env["extracts_dir"]
# Build a normal extract.duckdb with a registered table.
create_mock_extract(extracts_dir, "bigquery", [
{"name": "valid_table", "data": [{"id": "1"}], "query_mode": "local"},
])
# Drop an orphan parquet at the connector's data dir without registering it.
orphan_path = extracts_dir / "bigquery" / "data" / "orphan_test.parquet"
conn0 = duckdb.connect()
conn0.execute(
f"COPY (SELECT 1 AS id) TO '{orphan_path}' (FORMAT PARQUET)"
)
conn0.close()
assert orphan_path.exists()
# Register only the legitimate row in table_registry.
sys_conn = get_system_db()
try:
TableRegistryRepository(sys_conn).register(
id="valid_table", name="valid_table",
source_type="bigquery", query_mode="local",
)
finally:
sys_conn.close()
orch = SyncOrchestrator(analytics_db_path=e2e_env["analytics_db"])
orch.rebuild()
# The orphan parquet must NOT be exposed as a master view.
analytics = duckdb.connect(e2e_env["analytics_db"], read_only=True)
try:
views = {
r[0] for r in analytics.execute(
"SELECT table_name FROM information_schema.tables "
"WHERE table_type='VIEW'"
).fetchall()
}
finally:
analytics.close()
assert "valid_table" in views, views
assert "orphan_test" not in views, (
"orphan parquet without a registry row should not get a master view"
)