* Make /home install-hero links readable against blue background
The Claude license-options link added in the previous commit inherited
the default `<a>` style (`var(--hp-primary)` blue), which renders as
blue-on-blue and is unreadable inside the blue install-hero. Add a
scoped `.install-hero a` rule that uses white with an underline
(matching the existing lead-paragraph contrast pattern) so any link
nested in the hero stays legible.
* Reorder /home install flow: auto-mode is now Step 2, Agnes install becomes Step 3
Step 3 (was Step 2) pastes a ~20-command bash bootstrap into a fresh
Claude Code session. Without auto-mode enabled first, each Bash/edit
command needs a manual approve click — bad UX for first-time users.
Move auto-mode from the outside-hero `<details>` reference block into
the install-hero as a real Step 2, between "install Claude Code" and
"install Agnes". Content is the persistent `acceptEdits` snippet
(write to ~/.claude/settings.json) plus a one-liner pointing at
Shift+Tab for users who are already inside a running Claude Code
session. YOLO mode for full Bash auto-approve stays on
/setup-advanced behind the existing link.
The outside-hero `setup-collapsible[data-section="step3"]` block is
dropped — auto-mode is no longer reference content, it's a real
install step, and duplicating it would just diverge over time.
Onboarded users no longer see the auto-mode block at all (consistent
with Steps 1 + 3 also hiding post-onboarding).
Completion banner copy updated: "Step 1, 2 & 3 done — Claude Code
installed, auto-mode set, Agnes ready". Dashboard CTA partial and
other templates don't reference step numbers for this flow, so no
adaptation needed there.
* Simplify /home Step 2 to Shift+Tab only — drop the JSON snippet
Operator pointed out two issues with the prior Step 2:
1. The settings.json snippet is redundant. Claude Code's first
Shift+Tab cycle to auto-accept mode already prompts the user
whether to persist it as default — Claude writes the config
itself, no manual file edit needed.
2. The snippet only showed the POSIX path `~/.claude/settings.json`,
which doesn't translate to native Windows.
Replace the snippet + copy button with a plain Shift+Tab instruction,
explicitly call out the first-time "make this the default?" prompt,
and note that Claude handles the config write itself — same flow on
macOS / Linux / WSL / Windows. Adds a fallback line for users who
already closed the post-OAuth session.
* Tighten /home Step 2 install-note to two paragraphs
Operator: drop the 'Claude writes the setting itself, so this works
the same on macOS / Linux / WSL / Windows...' line plus the
'auto-approves file edits going forward; Bash commands stay gated
— that's the safe default' line. Both were filler — the make-default
prompt already implies persistence, and gated Bash is the obvious
default users won't be surprised by.
Result: paragraph 1 carries Shift+Tab + first-time make-default
say-yes + closed-session fallback in one breath; paragraph 2 keeps
the verbatim YOLO link. Same affordances, less vertical space.
* Capture session paths via SessionStart hook + lock parallel pushes
Replace the encoding-based scan of ~/.claude/projects/<encoded-cwd>/ with
a queue file populated by a new `agnes capture-session` SessionStart hook.
The hook reads the documented `transcript_path` field from Claude Code's
hook stdin JSON, sidestepping the cwd-to-folder encoding (which is an
internal implementation detail and varies by Claude Code version).
- New `agnes capture-session` subcommand appends transcript_path to
<workspace>/.claude/agnes-sessions.txt. Silent on all malformed input
so a hook chain failure doesn't clutter Claude Code startup.
- `agnes push` now consumes the queue: atomic snapshot rename guards
against hooks writing during the push window, successful uploads land
in agnes-sessions-uploaded.txt (TSV: timestamp + path), failed paths
are requeued.
- Cross-platform single-instance lock via the filelock package (fcntl
on POSIX, msvcrt on Windows). Concurrent SessionEnd hooks — common
when the user closes several sessions at once — silent-exit on the
losing side instead of all racing the upload.
- Recovery: pre-existing snapshot files from a crashed push are picked
up and processed before the live queue.
- The SessionStart `agnes push` self-heal entry is dropped — it became
redundant once the queue persists across runs (orphans from headless /
crashed sessions ship out on the next interactive SessionEnd push).
Existing workspaces auto-migrate via the marker-based replace logic.
- Legacy encoding scan stays available behind `--legacy-scan` for one-
off backfills of sessions predating the queue.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Add /agnes-private + statusLine indicator for private sessions
Users handling sensitive data inside Claude Code can now opt a session
out of the Agnes upload pipeline, either proactively (right after session
start) or reactively (mid-session). The `/agnes-private` slash command
runs `agnes mark-private` deterministically via `!`-prefix direct bash —
no AI in the loop. A workspace-installed statusLine surfaces a
`🔒 agnes-private` indicator in Claude Code's status bar so the user
sees the state at a glance.
Authoritative source of "do not upload" is a separate file
`<workspace>/.claude/agnes-sessions-private.txt` (one session_id per
line). Both `capture-session` (queue writer) and `push` (queue reader)
consult the list. This makes the slash-command / SessionStart-hook race
impossible by construction: whichever runs first, the session is correctly
filtered out.
- `agnes mark-private` reads `CLAUDE_CODE_SESSION_ID` from env (set by
Claude Code in every bash subprocess it spawns — stable documented API)
and appends to the private list.
- `agnes statusline` reads the session JSON Claude Code pipes on stdin,
checks the private list, and emits the indicator or nothing. Optimized
for the high call frequency of statusLine renders.
- `capture-session` extracts session_id from hook stdin and skips queue
write when the ID is already on the private list (race protection).
- `push` filters snapshot entries by the private list and appends to a
per-workspace audit log `agnes-sessions-private-skipped.txt`.
- Queue format migrated from `<path>` to `<session_id>\t<path>`; legacy
one-column lines still parse (empty session_id, still upload, can't be
marked private retroactively — fine, they pre-date the feature).
- `install_claude_hooks` writes a workspace statusLine unless the user
already has a custom one (warn + preserve). Idempotent re-init.
- `install_claude_commands` ships `agnes-private.md` alongside
`update-agnes-plugins.md`. Per-template fallback so a missing template
doesn't get clobbered with the wrong content.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Fix setup-prompt + CLAUDE.md marketplace copy + drop skills step
Three issues against the post-PR-#240 / post-PR-#237 state:
1. Setup prompt's marketplace block trailer (both has-stack and
empty-stack variants) claimed the SessionStart hook keeps the
marketplace clone in sync via `agnes refresh-marketplace --quiet`
on every session and that admin grants land automatically — both
false since PR #237 (0.47.x) moved the install/update path out of
the hook into the `/update-agnes-plugins` slash command. The hook
is `--check`-only: detects server-side changes, prompts the user
to run the slash command, which does the full reconcile
interactively with output visible in the transcript.
2. The empty-stack variant framed composition as "admin grants only",
missing the actual three-source served stack:
(admin RBAC ∩ /marketplace subscriptions)
∪ system-mandatory plugins (admin-pinned, auto-applied)
∪ Flea market installs (skills/agents bundled, plugins standalone)
Updated copy spells out all three sources so analysts know where
their stack picks live, and what the SessionStart hook actually
does on change detection.
3. CLAUDE.md template's "Agnes Marketplace" section conflated
eligibility (`resolve_allowed_plugins` — what's listed) with served
stack (`resolve_user_marketplace` — what actually reaches Claude
Code). The two are different: a user can be RBAC-eligible for a
plugin without having subscribed to it on /marketplace. Rewrote
the section to distinguish the eligibility set from the served
stack and to describe the `--check`-only hook accurately.
Plus: deleted the setup prompt's interactive Skills step (final step
before Confirm). The named-opinion question — "do you want me to
bulk-copy every skill into ~/.claude/skills/agnes/ or pull on-demand
via `agnes skills show <name>`?" — had no obvious right answer for
new users at the tail end of a wall of technical steps. On-demand
lookup is the one-size-fits-all default; `agnes skills list/show`
remain discoverable and the CLAUDE.md template references specific
skills inline (e.g. agnes-data-querying in the BigQuery section)
where they're relevant. Layout: Confirm shifts from step 9 to step 8.
Tests updated, full setup/marketplace/welcome surface green (115
passed). Remaining full-suite failures are pre-existing (BQ/Keboola
fixtures, Windows charmap collection error in test_v26_keboola_e2e)
— verified against a clean stash, unrelated to this diff.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Fix session-queue race + snapshot PID-reuse data loss
Two blocker fixes from the PR #242 review:
1. Concurrent SessionStart hooks could corrupt the queue file on
Windows. Python's `open(path, "a")` is not atomic there — the CRT
does not pass FILE_APPEND_DATA to CreateFile, so concurrent
appenders (user opening several Claude Code windows simultaneously)
could interleave bytes mid-line. The malformed lines then silently
fail the parser and the entries are dropped.
Fix: wrap append_to_queue, requeue_failed, and snapshot_queue in a
short-lived FileLock on a dedicated `agnes-queue.lock`. Separate
from `agnes-push.lock` so capture-session hooks don't block on the
push command. New test_append_concurrent_threads_no_corruption
reproduces the race with 4 threads x 50 appends.
2. Snapshot filenames embedded only the PID (`agnes-sessions.snapshot.
<PID>.txt`). After a crashed push left a snapshot on disk and the
OS recycled the PID for a new push, `os.rename` would atomically
overwrite the recovery snapshot — every entry in it lost, silently.
Fix: append a uuid8 hex tail (`agnes-sessions.snapshot.<PID>.
<uuid8>.txt`). find_recovery_snapshots already globs the prefix
so it picks up both old and new format. New
test_snapshot_filename_is_unique_per_call asserts two consecutive
snapshots under the same PID don't collide.
Targeted tests green (47/47 in session_queue/capture_session/cli_push).
Full suite failures unchanged from baseline (pre-existing BQ/Keboola
fixture issues per CLAUDE.md).
* Auto-refresh workspace hooks + bash-wrap all hook entries (Windows)
Fixes from PR #242 second review (ZdenekSrotyr):
1. `uv.lock` regenerated to include `filelock 3.29.0` (declared in
pyproject.toml but missing from the lock file — CI's
lockfile-consistency check would fail; `uv pip install` on a clean
cache would silently miss the dep).
2. `agnes self-upgrade` now auto-refreshes the workspace Claude Code
hooks via the new `cli.lib.hooks.maybe_refresh_claude_hooks`. Closes
the silent-stop migration gap: a v0.48 workspace would auto-upgrade
the CLI from its existing SessionStart self-upgrade entry but never
pick up the new `agnes capture-session` SessionStart hook, leaving
the queue empty and `agnes push` uploading nothing.
The refresh fires on both the "info is None" fast path (CLI already
current — catches the second SessionStart after a prior upgrade)
and the install-success path. Guarded by `workspace_has_agnes_hooks`
so it never writes `.claude/settings.json` into directories that
aren't Agnes workspaces (e.g. `agnes self-upgrade` invoked from
`~/`). Errors are surfaced on stderr but never flip the upgrade exit
code.
3. All Agnes-managed hooks are now wrapped in `bash -c "..."`. The
self-upgrade+pull chained SessionStart entry was the only one still
shipping unwrapped — Claude Code on Windows runs hook commands
directly without a shell, so the `;` chain + `2>/dev/null` +
`|| true` shell syntax silently no-op'd on native Windows installs
without Git Bash on PATH. Workspaces still on the old form
auto-upgrade via the refresh path above.
Tests: +12 in test_lib_hooks.py (guard semantics, v0.48→v0.49
migration end-to-end, third-party-hook preservation, bash-wrap
invariant). +5 in test_self_upgrade.py (refresh fires on info=None,
fires on install success, skipped on failure, skipped on --check-only,
refresh failure never flips exit code).
130 targeted tests green. The 2 pre-existing Windows path-separator
failures in `test_smoke_test_detects_version_mismatch[uv|pip]` are
unrelated (path mismatch `\fake\uv\bin\agnes` vs `/fake/uv/bin/agnes`
in test asserts, pre-PR baseline).
* CHANGELOG: document PR-242 main features
Closes ZdenekSrotyr #4: the [Unreleased] block was missing entries for
the PR's primary surface — only the post-merge fix bullets and the
unrelated setup-prompt copy change were captured. Adds:
- ### Added: 6 bullets covering the session capture queue + new
`agnes capture-session` subcommand, `/agnes-private` slash + `agnes
mark-private`, `agnes statusline` + statusLine wiring, `--legacy-scan`
opt-in fallback, single-instance push lock, and the new `filelock`
runtime dep.
- ### Changed: BREAKING bullet on the SessionStart / SessionEnd hook
wire format change (capture-session as first SessionStart entry,
push self-heal removed, SessionEnd push detached via nohup, all
entries bash-wrapped). Folds the prior standalone bash-wrap bullet
into this consolidated entry — Z's review flagged the layout shift
as BREAKING, and grouping the related sub-changes makes the
migration story readable in one place.
- Operator migration is auto-handled by `maybe_refresh_claude_hooks`
invoked from `agnes self-upgrade` (separate Changed entry below).
No `agnes init` re-run required. Pre-queue session jsonls on
upgrading workspaces still need a one-off `agnes push --legacy-scan`
— flagged in the BREAKING bullet.
No code change; doc only.
* Drop permanent 4xx uploads instead of requeueing forever
Closes ZdenekSrotyr #5. Previously the push retry path requeued any
non-200 response except the literal "file not found on disk", so 401
(token expired), 403 (RBAC denial), 413 (payload too large), 400
(server-side validation) cycled through every push run forever — the
queue grew without bound and each run re-bombarded the server with the
same deterministically-failing upload.
Now 4xx (except 408 Request Timeout + 429 Too Many Requests, which the
HTTP spec marks as transient) is dropped and audit-logged to
`<workspace>/.claude/agnes-sessions-failed.txt`:
<iso_ts>\t<session_id>\t<status>\t<transcript_path>
5xx and network errors continue to requeue — those reflect server /
transport state that can change between runs, so retry is the right
behavior.
The audit log piggybacks on the push single-instance lock
(agnes-push.lock) — push is the only writer to this file, same as the
existing `mark_uploaded` and `mark_private_skipped` paths, so no
separate filelock is needed.
`agnes push --json` surfaces a new `dropped_permanent` counter; non-
quiet stdout mentions the audit-log path so operators tailing the
output have a pointer to the forensic trail.
Tests: +7 in test_cli_push.py (401/400/403/413 → drop; 408/429 →
requeue; 500/502/503 → requeue; network exception → requeue;
--json `dropped_permanent` counter; stdout audit-log pointer). +1 in
test_session_queue.py (mark_failed_permanent TSV format).
127/129 targeted tests green. The 2 pre-existing Windows
path-separator failures in `test_smoke_test_detects_version_mismatch
[uv|pip]` are unrelated (path mismatch `\fake\uv\bin\agnes` vs
`/fake/uv/bin/agnes` in test asserts, pre-PR baseline).
* Catch OSError in push lock acquisition
Closes ZdenekSrotyr #8. `acquire_or_skip` in `cli/lib/push_lock.py`
previously caught only `filelock.Timeout`. Any `OSError` from
`FileLock.acquire` — read-only filesystem, permission denied on
`.claude/`, disk full, hardware I/O failure — propagated as an
unhandled traceback.
Two visible failure modes:
- SessionEnd hook: `|| true` in the wrapper swallowed the error, so
daily pushes silently never ran. Operator had no signal.
- Manual `agnes push`: ugly Python traceback dumped to the terminal
instead of a clean exit.
Now `OSError` is treated the same as `Timeout` — yield `None`, caller
returns cleanly with rc=0. The operator's environment in these
scenarios has bigger problems than missing session uploads, so we
swallow rather than retry-loop or surface a noisy warning.
Test: `test_push_silent_exit_when_filelock_raises_oserror` patches
the `FileLock` used inside `push_lock` to raise OSError on acquire,
verifies push exits 0 with no traceback and the queue is preserved
for the next attempt.
* Address remaining S2 items from PR-242 review
Four items from ZdenekSrotyr's S2 list:
S2.10 — `_install_statusline` truthy check (cli/lib/hooks.py): replace
`if existing:` with explicit `if existing is None or existing == "":`.
Documents and tests the behavior for both edge cases (explicit-null
and empty-string `statusLine`) — both treated as "not configured"
rather than "explicit user opt-out", so we install ours. Two new
tests in test_lib_hooks.py pin the contract.
S2.6 — onboarding docs for /agnes-private. New "Private sessions"
subsection in `config/claude_md_template.txt` (next to Data Sync)
covering the slash command, statusbar indicator, and audit-log
location. One-line tip in `app/web/setup_instructions.py` so the
feature is discoverable at onboarding.
S2.9 — e2e privacy test (tests/test_e2e_privacy.py). Wires
capture_session → mark_private → push against a recording fake
api_post and asserts zero session uploads for the marked one.
Three cases: mark-before-capture (queue write skipped),
mark-after-capture (push-side filter catches it + audit-logs),
control (unmarked sessions upload normally).
David #8 — `--legacy-scan` help text now documents the
private-list gap (legacy entries carry empty session_id, so
the filter is not consulted). The practical impact is bounded —
pre-queue sessions cannot have been marked private since the
private list is a queue-era feature — but the disclaimer in the
help text means an operator running a backfill is not surprised.
68 targeted tests green (3 new e2e + 2 new truthy edge tests +
existing). 2 pre-existing Windows path-separator failures in
test_smoke_test_detects_version_mismatch[uv|pip] unchanged.
Remaining S2 items (statusline mkdir push-back, capture-session
silent-fail follow-up) handled in PR comment + follow-up issue
respectively.
* Address remaining S2 follow-ups (David #8, S2.7, David #11)
Three items left over from Mina's bbf63472 batch — that commit
addressed S2.6/S2.9/S2.10 + documented David #8 in help text but
deferred the actual implementations of S2.7, David #11, and the real
David #8 fix to follow-ups. This commit closes them.
David #8 — `agnes push --legacy-scan` now consults the private list.
Claude Code names jsonls `<session-id>.jsonl`, so the file stem IS
the session id; the legacy-scan path can apply the same private filter
the queue path uses. Both the dry-run and live-upload code paths fixed.
Help text updated (no longer warns the filter is bypassed). Two new
tests in test_cli_push.py cover the upload-skip path + the dry-run
`would_skip_private` segregation.
S2.7 — `statusline`/`is_private` no longer mkdir-pollutes arbitrary
workdirs. Split `_claude_dir` into `_claude_dir_writable` (used only
from `add_private`) and `_claude_dir_readonly` (no mkdir). The
read-only public helpers (`private_list_path`, `read_all_private`,
`is_private`) compose the no-mkdir variant by default; `add_private`
opts in via `writable=True`. Added a process-local mtime-keyed cache
around `read_all_private` so in-process callers (push doing one stat
per upload candidate, future `agnes diagnose`) don't re-parse the
file on every check. Cache eviction on `add_private` so a sub-second
write+read sequence doesn't see stale data even on coarse-mtime
filesystems. Two new tests pin the no-mkdir contract + the
in-same-second add+read consistency.
David #11 — `agnes capture-session` writes a breadcrumb log on every
invocation. New `<workspace>/.claude/agnes-capture-session.log` TSV:
`<iso_ts>\t<outcome>\t<detail>` where outcome covers every silent-
exit path (`ok`, `private_skip`, `empty_stdin`, `bad_json`,
`not_object`, `no_transcript_path`, `stdin_read_error`,
`write_error`). Gives operators a signal to detect "hook fires but
queue stays empty" — without it, an upstream Claude Code stdin-
contract change is invisible because the hook always exits 0. Log
rolls at 256 KiB so it doesn't grow unbounded on long-lived
workspaces. Best-effort: a breadcrumb-write failure is itself
swallowed so the hook contract stays "exit 0 always". Skipped in
non-Agnes workdirs (no `.claude/` exists) so opening Claude Code
in `~/` doesn't pollute it. Five new tests in test_capture_session.py
cover the success / bad_json / no_transcript_path / private_skip /
no-pollute paths.
115 targeted tests green (test_cli_push, test_capture_session,
test_private_list, test_session_queue, test_e2e_privacy,
test_lib_hooks, test_statusline, test_mark_private).
---------
Co-authored-by: Minas Arustamyan <arustamyan.minas@gmail.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Co-authored-by: ZdenekSrotyr <zdenek.srotyr@keboola.com>
* Setup-prompt + bootstrap fixes from David's 2026-05-10 init report
Three issues from clean-machine bootstrap evidence:
1. `agnes refresh-marketplace --bootstrap` failed to recover when the
local clone existed but Claude Code's marketplace registry had lost
the `agnes` entry. Bootstrap path now parses
`claude plugin marketplace list`, re-runs
`claude plugin marketplace add ~/.agnes/marketplace` when missing,
and treats `add` failures as fatal (was warn-and-continue, root cause
of the cascade into "Marketplace 'agnes' not found" plugin install
errors).
2. Setup prompt now always emits the marketplace-registration block,
even when the operator has zero plugin grants. Pre-wires the
SessionStart hook so future admin grants land automatically without
re-running setup. Block copy adapts: empty list shows
"no plugins granted yet", populated list shows "install plugins".
3. Setup prompt registers the Atlassian Remote MCP server unattended
(`claude mcp add --transport sse atlassian
https://mcp.atlassian.com/v1/sse`). Hosted Remote MCP, OAuth handled
automatically by Claude Code on first use. Asana / GWS stay on the
/home connector cards (PAT/keychain flows don't fit unattended
bootstrap).
Confirm step nudges the user toward the /home connector cards for the
PAT-flow services. CLAUDE.md template renames the marketplace section
to "Agnes Marketplace" and documents that all plugins are addressed as
`<plugin>@agnes` regardless of upstream slug.
Layout: Confirm shifts from step 6/8 to step 9 across all variants
(preflight, marketplace, MCP all unconditional). Tests updated.
* Link Claude license options from /home install pane
Step-1 Claude install on /home pointed users to OAuth without
explaining what to do if they don't have a Pro/Max subscription. Add
a one-line follow-up link to the plan-tier section on /setup-advanced
(new `#claude-plan` anchor) so first-time users discover the
subscription tiers rather than bouncing on the OAuth screen.
* Add idempotent + no-TLS-bypass guardrails to /home connector prompts
The Asana / Google Workspace / Atlassian connector prompts on /home
already shipped a precheck step that short-circuits when the service
is already wired, but they didn't carry the same idempotency +
surface-errors-verbatim + don't-disable-TLS-verification guardrails
the bash bootstrap prompt has. Add a one-paragraph 'Ground rules'
block at the top of each prompt so a connector failure doesn't
tempt the model into bypass workarounds, matching the same posture
David's 2026-05-10 init report flagged for the bash flow.
* skip Source: lines in marketplace registry detector
`claude plugin marketplace list` prints a `Source: <local path>` line
under each registered marketplace; the local clone almost always lives
under a path containing the marketplace name itself
(`~/.agnes/marketplace`). A naive \\bagnes\\b match over the full
stdout therefore false-positives whenever ANY unrelated marketplace
sits under `~/.agnes-…/` or similar. Filter Source: lines out before
matching so the recovery path actually re-adds when needed instead of
silently falling through to a broken `marketplace update agnes`.
Adds regression test covering the substring-only case.
* drop customer-specific tokens from CHANGELOG entries
Per CLAUDE.md vendor-agnostic OSS rule ("nothing customer-specific
... in changelogs"):
- "agnes-vrysanek.groupondev.com" -> "a private-CA Agnes deployment"
- "Groupon Marketplace / groupon-marketplace" -> "<Org> Marketplace /
<org>-marketplace" (placeholder example)
- Removed "David flagged" attribution language; init-report context
stays intact, just stripped of the named host + brand
---------
Co-authored-by: ZdenekSrotyr <zdenek.srotyr@keboola.com>
The marketplace step (step 5) emitted `git config --global
http.<host>/.sslVerify false` on AGNES_DEBUG_AUTH=1 instances when no
ca_pem was readable from AGNES_TLS_FULLCHAIN_PATH. Two problems:
1. Claude Code auto-mode classifiers ("do not disable TLS verification"
rule) block the line, breaking hands-free setup.
2. It silently masked operator misconfiguration — a debug-auth instance
without a fullchain on disk fell through to a TLS-disabled clone
instead of surfacing the missing cert.
After the cross-platform trust block (#137), self-signed and private-CA
servers are fully covered by step 0 reading the fullchain via
_read_agnes_ca_pem; publicly-trusted certs need no bootstrap at all.
The legacy fallback no longer covers a real scenario — verified by
running step 5 without sslVerify=false against a self-signed instance.
BREAKING: drops `self_signed_tls` parameter from
app.web.setup_instructions.resolve_lines and render_setup_instructions
(only consumed by the deleted block). The AGNES_DEBUG_AUTH env var
itself is unchanged — still gates /api/me_debug and the dropdown link.
Co-authored-by: Minas Arustamyan <arustamyan.minas@gmail.com>
Adds end-to-end flow for installing and keeping the per-user filtered
Claude Code marketplace in sync with the user's Agnes stack
(admin RBAC grants \ MyAIStack opt-outs U /store installs).
Setup (one-liner in install prompt step 5):
`agnes refresh-marketplace --bootstrap` clones the per-user marketplace
bare repo to ~/.agnes/marketplace, strips PAT from the cloned origin
URL, registers the local path with Claude Code, and installs every
plugin in the served manifest at --scope project. Replaces a 15-line
inline shell sequence that tripped Claude Code's agent-driven `rm -rf`
permission gate.
Auto-refresh (SessionStart hook installed by `agnes init`):
`agnes refresh-marketplace --quiet` runs every Claude Code session,
fetches+resets the clone (server rebuilds as orphan commits, so
pull --ff-only is impossible), and version-aware reconciles:
- missing in workspace -> claude plugin install <name>@agnes --scope project
- version differs -> claude plugin update <name>@agnes
- matches -> skip
Don't auto-uninstall plugins that disappeared from the manifest --
a transient empty manifest from the server would wipe the stack.
Hook output: when --quiet AND something actually changed, emits Claude
Code hook JSON on stdout -- `systemMessage` (transient toast) and
`hookSpecificOutput.additionalContext` (model-side system reminder),
both carrying the change summary plus a "/exit + restart Claude Code"
instruction (Claude only scans plugins at session start).
Windows hook compatibility: the refresh-marketplace hook command is
wrapped in `bash -c "..."` because Claude Code on Windows runs hook
commands directly without invoking a shell, so `2>/dev/null || true`
would otherwise be passed as literal argv tokens.
Cross-cutting:
- cli/lib/marketplace.py: shared CLONE_DIR + MARKETPLACE_NAME constants.
- cli/lib/hooks.py: SessionStart now has two independent entries
(pull + refresh-marketplace) so a failure in one doesn't suppress
the other; legacy `da sync` and prior single-pull layouts upgrade
cleanly on re-init.
- PAT injection on every git fetch via per-invocation credential
helper (token in \$AGNES_TOKEN env, never in argv or .git/config).
- Pre-snapshot of installed plugins captured BEFORE
`claude plugin marketplace update` so silent auto-applied version
bumps still fire notifications.
- scripts/dev/agnes-client-reset.sh: cleans ~/.claude/plugins/marketplaces/agnes,
~/.claude/plugins/cache/agnes, drops uv build cache, documents
workspace-scoped residue that can't be enumerated from the script.
- app/web/setup_instructions.py: legacy AGNES_DEBUG_AUTH path also
uses clone (direct HTTPS marketplace add is broken end-to-end on
every Claude Code distribution -- stores response as single file,
plugin source paths then 404).
28 new tests (test_cli_refresh_marketplace.py) + extended hook + setup
template tests cover bootstrap, fetch+reset ordering, version-aware
reconcile, project-path filtering, hook JSON shape, and the bash-c
Windows wrapper invariant.
Adds `test_unified_flow_uses_only_agnes_verbs` that asserts no `da `
substring (with trailing space, to dodge false positives on `Darwin` /
`database` / `adapter`) appears in any of the four
`resolve_lines()` shapes:
- bare (no plugins, no ca)
- plugins only
- ca only
- plugins + ca
Also pins the `agnes init --server-url … --token …` shape — commit
8784f10a's stale-on-disk-token fix relies on `init` receiving an
explicit `--token` argument; if a future refactor drops the flag from
the emitted command the test fails loudly instead of silently
regressing to 401-on-stale-token in production.
Plan: docs/superpowers/plans/2026-05-04-unified-setup-prompt.md task 10.
Renames `_git_check_block` to `_preflight_block` and adds a
`claude --version` check beside `git --version`. Both binaries are
required by the marketplace step — git for the clone fallback,
claude for `claude plugin marketplace add` / `claude plugin install` —
so checking them together gives one clear failure instead of two
confusing downstream errors.
Install hints: `npm i -g @anthropic-ai/claude-code` for Linux / WSL
plus a doc URL (https://docs.claude.com/claude-code) for the native
macOS / Windows installers. We don't try to one-line a native
installer; the canonical instructions live upstream.
Plan: docs/superpowers/plans/2026-05-04-unified-setup-prompt.md task 3.
Adds `_step_numbers(*, has_marketplace, has_skills)` so step numbering
lives in one place instead of being split across three branches in
`resolve_lines`. Pins the unified layout in the tests:
No plugins: 1 install, 2 init, 3 catalog, 4 diagnose, 5 skills, 6 confirm
With plugins: 1, 2, 3, 4 preflight, 5 marketplace, 6 diagnose, 7 skills, 8 confirm
`agnes auth import-token` / `agnes auth whoami` are now banned from the
rendered prompt — `agnes init` subsumes them. The renamed
`test_resolve_lines_no_plugins_unified_six_step_layout` asserts those
strings are absent and that the new step headers (`Bootstrap your Agnes
workspace`, `Verify the data is queryable`) are present.
Plan: docs/superpowers/plans/2026-05-04-unified-setup-prompt.md task 2.
Removes the `role: Literal["analyst", "admin"]` parameter from
`resolve_lines` / `render_setup_instructions` and deletes the
`_resolve_analyst_lines`, `_analyst_init_lines`, `_analyst_finale_lines`
helpers. The unified flow now always emits `agnes init` (the
workspace-rails delivery mechanism) in place of the legacy
`agnes auth import-token` + `agnes auth whoami` pair, and uses
`agnes catalog` as the smoke-verify step.
`agnes init` already verifies the PAT internally, and `agnes catalog`
doubles as a data-plane smoke check, so dropping `agnes auth whoami`
costs no signal.
Drops the now-redundant `tests/test_setup_instructions_analyst.py` and
patches the one ordering test in `tests/test_setup_instructions.py` that
referenced the old "Log in" / "Verify the login" headers. Also strips
the `role=role` kwarg from `compute_default_agent_prompt`'s call into
`resolve_lines` so the welcome-template render path keeps working;
welcome_template.py's own role param is removed in a follow-up task.
Plan: docs/superpowers/plans/2026-05-04-unified-setup-prompt.md task 1.
- Add GET /setup serving install.html (CLI + Claude Code setup page)
- Add GET /install → 301 redirect to /setup for backwards compat
- Move first-time setup wizard from /setup to /first-time-setup
- Update nav link: href=/setup, label 'Setup local agent', active on both /setup and /install paths
- Update page <title> to 'Setup local agent — …'
- Update /dashboard and /setup comment in _claude_setup_instructions.jinja
- Update tests and OpenAPI snapshot accordingly
Bootstraps the Agnes Claude Code marketplace + RBAC-allowed plugins from
the dashboard CTA, and inlines the server's TLS cert when the chain isn't
publicly trusted (self-signed / private CA). Cross-platform setup prompt
covers Windows Git Bash, macOS, Linux. Includes Bun-compiled `claude` fix
(macOS goes via git-clone fallback, same as Windows), PAT stripping after
clone, explicit error handling, and four rounds of Devin Review fixes
(phantom step references, $PLATFORM re-detection, heredoc/awk line-count
sync). Cuts 0.21.0.
See CHANGELOG.md [0.21.0] section for details.
* fix(cli): versioned wheel URL in setup instructions; drop broken /cli/agnes.whl alias (#36)
* fix(cli): inline PEP 427 wheel filename in setup instructions
`uv tool install <server>/cli/agnes.whl` fails with
error: The wheel filename "agnes.whl" is invalid: Must have a version
because uv validates the filename in the URL path *before* fetching — so
the server-side Content-Disposition header (which has the real versioned
filename) is never consulted, and an HTTP redirect does not help either:
uv resolves the filename from the initial URL.
Fix the root cause by inlining the real PEP 427 filename into the setup
snippet the dashboard copies to the clipboard. The wheel filename is
resolved server-side via `_find_wheel()` and substituted into the lines
returned from `setup_instructions.resolve_lines()`, so both the read-only
HTML preview and the JS clipboard renderer get byte-identical output.
Also added `/cli/wheel/{filename}` to serve wheels at their PEP 427 path,
and kept `/cli/agnes.whl` as a 302 redirect for manual/legacy callers —
though that redirect alone is NOT sufficient for `uv tool install` (uv
validates before following redirects) and is there only as defense-in-depth.
Verified locally:
- `uv tool install <server>/cli/wheel/agnes_the_ai_analyst-2.0.0-py3-none-any.whl` succeeds
- `/install` HTML now renders the versioned URL; `/cli/agnes.whl` no longer appears in the rendered snippet
* fix(cli): remove /cli/agnes.whl alias entirely — it only confused users
The bareword alias was never actually usable:
- `uv tool install <server>/cli/agnes.whl` fails at filename validation
before any HTTP fetch, so neither the Content-Disposition header nor a
302 redirect rescued it.
- The 302-to-versioned-path fallback left a visibly "working" URL in
browser / curl -L contexts, which is exactly how the original bug got
reported in the first place ("the URL loads, why doesn't install work?").
Remove the endpoint and scrub all remaining references. The only CLI wheel
URL is now `/cli/wheel/{filename}` with the real PEP 427 filename, which
the setup-instructions template already generates server-side.
Existing tests that referenced /cli/agnes.whl become negative tests
("must not appear") so we don't regress.
* feat(cli): --version flag; sync --dry-run + progress indicator (#38)
* feat(cli): add --version / -V flag
Prints `da <version>` from package metadata (importlib.metadata). Falls
back to "unknown" when the package is not installed (e.g. running from a
source checkout without `uv pip install -e .`), instead of crashing.
Eager typer callback, so `da --version` exits before subcommand
resolution and does not require any auth/config.
* feat(cli): da sync --dry-run + X/N progress indicator
--dry-run reports what would be downloaded/uploaded without hitting the
API or writing local state. Supports the full flag set (--table, --json,
--upload-only); JSON shape is {"dry_run": true, "would_download": [...],
"summary": {...}}.
Progress bar now shows "[X/N] Downloading <table>..." with a Rich
BarColumn + TaskProgressColumn + TimeElapsedColumn instead of a bare
spinner — makes long syncs visible.
* feat(cli): durable sync + server gzip + auto-update check (#41)
* fix(sync): atomic writes + manifest hash verification + retry on transient errors
Three durability hooks around stream_download and the sync command:
1. Atomic writes. stream_download now streams into `<target>.tmp` and
calls os.replace() on success, so the real target file never exists
in a half-written state. On failure the tmp is unlinked — no cleanup
leftovers, no guard needed at read time.
2. Retry with backoff. Transient errors (ConnectError, ReadError,
WriteError, RemoteProtocolError, TimeoutException, 5xx) are retried
up to 3× with 0.3s / 1s / 3s backoff. 4xx (auth, 404) surfaces
immediately — retrying those is pointless.
3. Manifest-hash verification. After download, sync.py computes MD5 of
the target (same 8KiB chunking as app/api/sync.py:_file_hash) and
compares against `server_tables[tid]["hash"]`. Mismatch ⇒ unlink,
record error, skip state commit. The PAR1 structural check survives
as a fallback for legacy manifests without a hash.
Also makes _rebuild_duckdb_views tolerant: single broken parquet is
skipped with a stderr warning instead of killing the whole rebuild.
Supersedes #40 — this commit is a strict super-set (hash check + PAR1
fallback + atomic write + retry). #40 can be closed without merging.
* perf(server): enable GZipMiddleware for JSON / HTML responses
GZipMiddleware at minimum_size=1024 shaves bandwidth on manifest-style
JSON endpoints (/api/sync/manifest, /api/version, …) and the /install
HTML preview. Parquet file downloads are already columnar-compressed so
the middleware sees limited benefit there — but it doesn't hurt, httpx
on the client side decompresses transparently.
Placed after session middleware so gzip wraps the session-Set-Cookie
response too, and before CORSMiddleware so compression is applied to
both cross-origin and same-origin responses.
* feat(cli): auto-check for newer CLI version on startup
Server side
- GET /cli/latest returns {version, wheel_filename, download_url_path}
for whatever wheel is currently in AGNES_CLI_DIST_DIR. Public,
cacheable, no secrets — consumed by the CLI auto-update probe.
Client side
- New cli/update_check.py: reads /cli/latest with a 3s timeout, caches
the result in $DA_CONFIG_DIR/update_check.json for 24h. Cache is
invalidated when the installed version changes (e.g. after a fresh
`uv tool install`) so stale "you're behind" warnings don't linger.
- Root typer callback fires the probe before subcommand dispatch; any
failure is swallowed so a bad network never blocks a working command.
- Outdated → one-line stderr warning:
[update] da 2.0.0 is out of date — latest on this server is 2.1.0.
Upgrade: uv tool install --force <server>/cli/wheel/<…>.whl
- Disable with DA_NO_UPDATE_CHECK=1.
* fix(pr-review): None-guard the upgrade line + skip gzip on parquet paths
Two follow-ups from Devin review on #41.
1. format_outdated_notice(UpdateInfo(download_url=None)) emitted literal
"uv tool install --force None" — copy-pasting that fails. Drop the
upgrade snippet when the URL is absent and keep only the version line.
2. GZipMiddleware compressed everything over 1024 bytes, including the
parquet FileResponses served by /api/data/{tid}/download,
/cli/wheel/{name}, and /cli/download. Parquet is already columnar-
compressed — gzip there is pure CPU + latency with no size win, and
/api/data bodies can reach hundreds of MB. Wrap GZipMiddleware in a
small _SelectiveGZipMiddleware that skips those path prefixes and
delegates the rest to the stock middleware. JSON / HTML endpoints
(manifest, /install, /api/version, …) still get compressed.
* release: bump to 2.1.0 — unify AGNES_VERSION with pyproject.toml version (#42)
Before: two independent version systems. pyproject.toml carried semver
(2.0.0 → wheel filename → `da --version`) while release.yml injected
CalVer into AGNES_VERSION (e.g. 2026.04.155 → /api/version). Users saw
different strings in the CLI vs. the /install page, and the CLI auto-
update check couldn't tell "new deploy, same package version" apart
from "new package version".
Make pyproject.toml [project].version the single product-version source
of truth. release.yml extracts it and feeds AGNES_VERSION, so every
surface (/api/version, /api/health, /cli/latest, `da --version`) agrees
on one number. The CalVer tag keeps doing what CalVer is for: release
identity on the git tag and Docker image tag (versioned_tag).
Also wires AGNES_TAG through the build: release.yml → Dockerfile ARG →
env, so /api/version.image_tag finally reports the actual image tag
instead of the "unknown" fallback.
Bump to 2.1.0 to reflect the PRs shipped on ps/wheel-name-fix: durable
sync (atomic writes + manifest MD5 + retry), server GZip, CLI auto-
update probe, setup snippet PEP 427 URL.
* fix(pr-review): directional version compare in is_outdated()
UpdateInfo.is_outdated() used `self.latest != self.installed`, which
fires in both directions. If the server is rolled back or the user
connects to an older deployment, the CLI would warn "out of date"
and — worse — the formatted notice would prompt
uv tool install --force <older-version>.whl
i.e. an unintended downgrade.
Compare with packaging.version.Version (PEP 440 aware, handles pre-
release tags). Fall back to dotted-int tuple compare if packaging is
somehow missing, and return False on unparseable strings — better to
miss an upgrade hint than to silently suggest a downgrade.
Adds 4 test cases: installed older (True), installed newer (False),
10.0.0 vs 2.1.0 lexical-compare trap (correct), unparseable strings
(False).
Addresses Devin review on #43.
* fix(pr-review): read FastAPI app version from package metadata
app/main.py:80 hardcoded `version="2.0.0"` in the FastAPI constructor.
After #42 bumped pyproject.toml to 2.1.0, /api/version, /cli/latest,
and `da --version` all reported 2.1.0 while /openapi.json and the
/docs UI still advertised 2.0.0.
Read `agnes-the-ai-analyst` version via importlib.metadata (same
pattern cli/main.py:_cli_version already uses), with a `"dev"`
fallback when the package is not installed (source checkout). This
way pyproject.toml stays the single source of truth across every
version surface — /openapi.json now tracks the bump automatically.
Adds a dedicated test file to pin this behavior so a future
regression to a hardcoded literal fails at CI.
Addresses second Devin finding on #43.
* fix(pr-review): _fmt_bytes PiB label + negative cache in update_check
Two more follow-ups from Devin review on #43.
1. _fmt_bytes off-by-unit. The old loop exited at TiB but the fallback
labelled PiB, so 1 PiB rendered as "1024.0 PiB". Restructure: put
every unit inside the loop (KiB through EiB) so the division count
always matches the label. Covers up to 1 ZiB cleanly; anything
beyond renders as "<big>.0 EiB" rather than crashing.
2. Negative cache for failed /cli/latest probes. On a corporate
firewall / VPN that silently drops packets, the 3s HTTP timeout
fired on *every* `da` invocation. Writing a `latest=None` cache
entry with a 5-minute TTL caps that at one probe per 5min. Successful
probes still use the 24h TTL. Reading logic branches on whether the
cached `latest` is None.
Adds TestFmtBytes (2 cases: small/medium sizes and the PiB/EiB fallback
regression), plus two TestSync update-check cases covering negative-
cache reuse and TTL expiry.
Vojtech