- instance.brand (env AGNES_INSTANCE_BRAND, default "Agnes") +
instance.workspace_dir replace hard-coded "Agnes" / "~/Agnes" across
/home, /setup, /setup-advanced, /login, /install, /me/debug, and the
Claude Code clipboard setup script. Terraform-friendly env override;
defaults preserve existing Agnes branding.
- Explicit "create workspace folder" step on /home (OS-tabbed mkdir+cd)
+ same step baked into the clipboard script as step 2. Drops the
implicit assumption that `agnes init --workspace .` lands in a
sensibly-cd'd shell.
- Final "Restart Claude Code" step in the setup script (unconditional,
between connectors and Confirm) so freshly-installed plugins, MCP
servers, and SessionStart hooks load on the next Claude Code session.
- Asana reverted from hosted Remote MCP back to PAT + raw REST against
app.asana.com/api/1.0. MCP envelope shape consumed ~5x tokens per
call; the PAT path lets the agent read flat REST fields. Existing
MCP registration is detected and the user is asked whether to remove
it (default Y, with benefits listed: token cost, no third-party hop,
no OAuth refresh dance, deterministic envelope shape).
- Atlassian connector instructs picking the longest API-token expiry
(today "1 year") to cut re-mint friction. No public query-parameter
hook exists on id.atlassian.com to pre-select expiry, so the prompt
documents the manual click and acknowledges that limitation.
- Uniform ✅ / ❌ per-connector marker contract (Asana, GWS, Atlassian)
for the Confirm summary to grep. Each connector now ends with a
Claude-driven end-to-end test that uses Claude Code's own bash to
exercise the stored credential and prints
"✅ <Connector> integration verified — ..." (or the failure variant).
* fix(cta): fall back to textarea+execCommand when Clipboard API rejects
The "Setup a new Claude Code" CTA fetches /auth/tokens, parses the JSON
response, renders the setup script, THEN calls
`navigator.clipboard.writeText()`. Modern browsers (Safari, Firefox, and
Chrome on stricter configurations) reject `writeText` with
NotAllowedError when transient user activation has been consumed by an
intervening `await` — which is exactly the case here. Users perceived
this as "the browser blocked the copy" and got the manual-paste fallback
modal even though the textarea + `document.execCommand('copy')` path
WOULD have worked synchronously without needing fresh user activation.
`copyToClipboard` now:
- prefers the modern Clipboard API (unchanged for the happy path)
- on writeText rejection, falls back to `copyViaTextarea` instead of
surfacing the rejection to the caller's catch block.
`copyViaTextarea` is the previously-inline textarea fallback factored
out into a named helper, with two small hardening touches:
- `readonly` + `tabindex=-1` so the hidden textarea doesn't steal
focus or pop the virtual keyboard on mobile.
- explicit `setSelectionRange(0, text.length)` to belt-and-braces the
selection on iOS Safari (where `.select()` alone sometimes selects
zero chars on touch-focused textareas).
Only the CTA button needed this — the Step-1 install-command and the
connector-copy buttons all call `writeText` synchronously inside the
click handler (no awaits in between), so they keep their existing
user-gesture context and didn't hit the same rejection. No template
changes there.
* refactor(home): fold Atlassian MCP registration into connectors block
The standalone "Register the Atlassian MCP server" step (was step 6 in
the unified setup script) moves INTO the Atlassian connector's prompt
body so all Atlassian-related setup lives in one logical group. Same
intent that #247 carried for connectors, applied one level deeper:
the hosted Remote MCP registration is part of "set up Atlassian", not
its own ungrouped step.
What changed:
- `app/web/connector_prompts.py` — the Atlassian prompt's step 5
replaces the speculative "Register the on-demand Atlassian MCP under
.claude/mcp/atlassian" line with the actual hosted Remote MCP
registration: `claude mcp add --transport sse atlassian
https://mcp.atlassian.com/v1/sse || true`. The `|| true` keeps re-runs
idempotent and the body explains the OAuth-on-first-use contract.
Both /home's Atlassian tile and the inlined setup-script Atlassian
sub-block emit this line — single source of truth holds.
- `app/web/setup_instructions.py` — `_mcp_servers_block` deleted; the
`mcp_servers` step is removed from `_step_numbers`; resolve_lines no
longer calls it.
- Renumbering: install (1), init (2), catalog (3), preflight (4),
marketplace (5), diagnose (6), connectors (7), confirm (8). Was:
6 = mcp_servers, 7 = diagnose, 8 = connectors, 9 = confirm.
- `tests/test_setup_instructions.py` — Confirm step 9→8, Connect 8→7,
diagnose 7→6, mcp_servers references dropped.
`test_step_numbering_with_connectors_step` now asserts
`"mcp_servers" not in steps`. Stray-Confirm assertion lists shift
by one position.
- `tests/test_setup_page_unified.py` + `tests/test_web_ui.py` — same
step-number shifts in the rendered /setup preview assertions.
The `claude mcp add` line is still the Atlassian Remote-MCP path that
the 2026-05-10 init-report Fix C added — only its position in the
flow changes. /home Atlassian tile copying continues to install the
MCP too (the prompt body the tile pastes contains the same line).
112 tests pass.
* feat(atlassian): operator-overrideable base URL via AGNES_ATLASSIAN_BASE_URL
Adds an env var / YAML key the operator (Terraform module, customer-VM
template, OSS instance.yaml) can set to bake the Atlassian Cloud site
root into the connector prompt — so end users don't have to guess /
paste their org's `https://<myorg>.atlassian.net`.
When set, the Atlassian connector prompt (rendered on both /home tile
and inlined into the setup-script step 7 Atlassian sub-block) replaces
step 1's "Ask me for my Atlassian Cloud site URL and email" with a
one-line note that the URL is already provisioned by the operator and
asks only for the email. Step 4's helper-script body has the
`BASE_URL='<the site URL I gave you>'` placeholder substituted with
the literal value. When unset (empty), the existing "ask the user"
flow remains — no regression for OSS instances.
Resolution + normalization in `get_atlassian_base_url()`:
- env `AGNES_ATLASSIAN_BASE_URL` > yaml `instance.atlassian.base_url` > ""
- strips trailing slash + trailing `/wiki` so the canonical value is
the bare site root. Matches the per-user helper script's
normalization at storage time (atlassian_prompt step 4 guard 2), so
the literal baked in by the operator stays consistent with what the
user's helper script would have computed from their input.
Plumbing:
- `app/instance_config.py`: new `get_atlassian_base_url()` resolver.
- `app/web/connector_prompts.py`:
- `atlassian_prompt(*, base_url: str = "")` — string-replace two
explicit placeholder phrases when base_url is truthy; otherwise
return the prompt unchanged.
- `all_connector_prompts(..., atlassian_base_url: str = "")` —
forwards the kwarg.
- `app/web/router.py` (`_build_context`): reads
`get_atlassian_base_url()` and passes it through to
`all_connector_prompts(...)` so both the /home tile context AND the
inlined-script `resolve_lines(...)` call use the same value.
- `src/welcome_template.py` (`compute_default_agent_prompt`): same
threading via the existing import-on-demand path.
Tests (`tests/test_home_route_resolution.py`):
- `get_atlassian_base_url` resolver: default empty, env override,
trailing-slash strip, trailing-`/wiki` strip.
- `atlassian_prompt(base_url=...)`: literal URL baked in, ask-step
removed, placeholder replaced, operator-baked-in copy appears.
- `atlassian_prompt(base_url="")`: existing ask-the-user flow
unchanged.
- `all_connector_prompts(atlassian_base_url=...)`: kwarg threads
through to the rendered atlassian prompt.
135 tests pass.
* feat(asana): register hosted Asana Remote MCP in connector prompt
The Asana connector prompt only stored a PAT in the OS keychain + ran
a curl verify against /api/1.0/users/me. That set Claude Code up for
direct `curl` calls but didn't actually wire Asana into Claude's tool
list — so the user couldn't ask Claude to "find my open Asana tasks"
and have it work. Symmetric oversight to the Atlassian connector's
original speculative `.claude/mcp/atlassian` line that this branch
already replaced with `claude mcp add --transport sse atlassian
https://mcp.atlassian.com/v1/sse`.
Adds a new step 5 that registers Asana's hosted Remote MCP:
claude mcp add --transport http asana https://mcp.asana.com/mcp || true
This is the V2 endpoint (streamable HTTP transport, launched February
2026). The V1 SSE endpoint at https://mcp.asana.com/sse was deprecated
2026-05-11 (today) and must NOT be used — calling it out explicitly
in the prompt body so a future operator who finds an old reference
doesn't paste the dead URL. OAuth is handled by Claude Code at first
use, same model as the Atlassian MCP step.
The PAT stored in step 3 stays for direct `curl` calls (precheck +
ad-hoc scripts) — the MCP path uses its own OAuth grant, not the PAT.
Old step 5 (revoke instructions) renumbers to step 6 and adds the
`claude mcp remove asana` cleanup hint.
Same single-source-of-truth invariant holds: /home Asana tile + the
inlined Asana sub-block in the setup script (step 7 connectors) both
emit identical text from `asana_prompt()`.
71 tests pass.
* feat(asana): drive MCP OAuth login + end-to-end validation post-register
`claude mcp add --transport http asana ...` only registers the
server in Claude Code's local config — it does NOT trigger OAuth.
The browser tab opens the first time any `mcp__asana__*` tool gets
invoked. So the previous step 5 left a user looking at a "registered"
MCP that, in practice, hadn't authed yet and would fail on first
real use. Same blind spot Atlassian's prompt also has, but Asana was
the one called out in the latest review pass.
Adds a new step 6 between MCP registration (step 5) and the revoke
instructions (now step 7):
a. Tell the user verbatim what's about to happen — a low-impact
read through the MCP will pop the OAuth browser tab; sign in
with the same account whose PAT they stored in step 3 and
approve. Frames the OAuth as one-time so users don't wait
for it on every later call.
b. Drive an actual MCP read. Don't prescribe the exact tool name
because the Asana MCP's exposed surface (`mcp__asana__*`) is
versioned upstream and we don't want to pin to a name that
gets renamed. Instead: tell Claude to pick the lightest read
from its surfaced tool list (users-me / list-workspaces /
equivalent). Document the recovery path when Claude Code
times out waiting for the OAuth tool use: `claude mcp list`
to confirm registration before retrying.
c. Print a single one-line proof that combines wiring + auth:
"Asana MCP connected as <name> — <N> workspace(s) visible."
Explicit anti-echo callout for tokens, task content, comments.
On failure, surface the exact Claude-Code error and stop —
no silent pass.
d. Sanity-check that the MCP OAuth identity and the PAT identity
reference the same Asana account. Easy mistake to make when
the user has multiple Asana accounts — flag only on mismatch,
keep quiet when they match. Recovery: `claude mcp remove asana
&& claude logout asana` then redo step 5.
Step 7 (revoke) absorbs both the keychain delete + the
`claude logout asana` line so users have a single place to undo
everything.
43 tests pass.
* fix(init): clear stale CA env vars on Windows before any TLS handshake
Reported by the 2026-05-11 Windows test pass: after `agnes init` the
gws connector failed with `UnknownIssuer` TLS errors because
`SSL_CERT_FILE` and `REQUESTS_CA_BUNDLE` were still set in Windows
User scope pointing at `C:\Users\localadmin\.config\agnes\ca-bundle.pem`
— a file that did not exist on the test host. Past Agnes installs
(the setup-prompt trust block + older bootstrap helpers) write those
pointers when they materialize a combined Agnes-CA bundle; when the
bundle file later disappears (re-init on a new VM, machine swap, the
~/.agnes dir wiped), the pointers go stale and every native Windows
TLS handshake fails before Agnes itself runs. SSL_CERT_FILE in
particular REPLACES (not appends to) the trust store, so a stale
pointer is silently catastrophic.
`agnes init` now clears stale pointers in two layers before the first
server roundtrip:
1. Current-process env (os.environ) — what the immediately-following
`api_get` to /api/catalog/tables actually reads. Without this, init
itself blows up before it gets to step 2.
2. Windows User-scope env via PowerShell
`[Environment]::SetEnvironmentVariable(name, $null, 'User')` — what
every future shell + every native tool (gws, claude.exe, pip, uv)
inherits. The 2026-05-11 reporter expected this exact cleanup
("init was supposed to clear these but they persisted").
The cleanup is best-effort and conservative:
- Only deletes a var when its value points at a path that does NOT
exist on disk. Intentional operator config (e.g. SSL_CERT_FILE
pointing at a corp certifi bundle) stays put.
- PowerShell missing / restricted execution policy / WSL-without-pwsh:
swallowed silently. The current-process leg still runs, which
unblocks init even on hosts where the User-scope leg cannot fire.
Tests (`tests/test_init_ca_cleanup.py`, 6 cases):
- Stale pointers → removed from process env.
- Real-path pointers → preserved.
- Non-Windows hosts: PowerShell is not invoked.
- Windows hosts: PowerShell IS invoked with a script that checks
all three vars + uses Test-Path + SetEnvironmentVariable.
- PowerShell FileNotFoundError: cleanup swallows it, does not raise.
- `_is_windows_host()` reflects sys.platform.
* refactor(asana): MCP-first flow — drop PAT storage, precheck via `claude mcp list`
The Asana hosted MCP at https://mcp.asana.com/mcp authenticates via
OAuth (Claude Code holds the grant; browser tab pops on first tool
use). The earlier prompt walked the user through creating + keychain-
storing an Asana Personal Access Token AND registering the MCP — two
parallel auth surfaces for one connector. Once the MCP works, the PAT
has no consumer: the precheck/verify steps that used `curl
$BASE/api/1.0/users/me` are just redundant proof that Asana itself is
reachable, which the OAuth handshake already establishes.
Removed:
- Step 0 keychain probe + curl verify against /users/me with PAT.
- Step 1 open developer-console / create PAT.
- Step 2 click "+ New access token", warn shown-ONCE.
- Step 3 helper-script for keychain-storage (per-OS bodies: macOS
`security add-generic-password`, Linux `secret-tool store`, Windows
`cmdkey /generic`).
- Step 4 PAT-side `users/me` verify.
- Step 5's split that kept the PAT around for direct curl scripts.
- Step 6d's "MCP vs PAT identity sanity check" — there is no PAT
anymore, nothing to mismatch against.
New flow (3 steps total):
- Step 0 precheck: `claude mcp list | grep ^asana` — if found, the
server is registered AND Claude Code is holding its OAuth grant
(otherwise prior failure would have removed it); print
"Asana MCP already registered — skipping setup" and stop. Tells the
user the explicit reset command (`claude mcp remove asana && claude
logout asana`) so a re-register stays one paste.
- Step 1: `claude mcp add --transport http asana
https://mcp.asana.com/mcp` — no `|| true` because step 0 should have
caught the "already exists" case. Step explains the V2-vs-V1
endpoint distinction (V1 SSE deprecated 2026-05-11) and the
abort-clean recovery if the precheck somehow missed the existing
server.
- Step 2: same OAuth + low-impact-read validation pattern as before.
- Step 3: revoke instructions (mcp remove + logout + Asana-side app
revoke at app.asana.com/Settings → Apps).
Both surfaces (the /home Asana tile and the inlined Asana sub-block
in the setup script's step 7) emit the new text from the same
asana_prompt() — single-source-of-truth invariant intact.
77 tests pass.
* Make /home install-hero links readable against blue background
The Claude license-options link added in the previous commit inherited
the default `<a>` style (`var(--hp-primary)` blue), which renders as
blue-on-blue and is unreadable inside the blue install-hero. Add a
scoped `.install-hero a` rule that uses white with an underline
(matching the existing lead-paragraph contrast pattern) so any link
nested in the hero stays legible.
* Reorder /home install flow: auto-mode is now Step 2, Agnes install becomes Step 3
Step 3 (was Step 2) pastes a ~20-command bash bootstrap into a fresh
Claude Code session. Without auto-mode enabled first, each Bash/edit
command needs a manual approve click — bad UX for first-time users.
Move auto-mode from the outside-hero `<details>` reference block into
the install-hero as a real Step 2, between "install Claude Code" and
"install Agnes". Content is the persistent `acceptEdits` snippet
(write to ~/.claude/settings.json) plus a one-liner pointing at
Shift+Tab for users who are already inside a running Claude Code
session. YOLO mode for full Bash auto-approve stays on
/setup-advanced behind the existing link.
The outside-hero `setup-collapsible[data-section="step3"]` block is
dropped — auto-mode is no longer reference content, it's a real
install step, and duplicating it would just diverge over time.
Onboarded users no longer see the auto-mode block at all (consistent
with Steps 1 + 3 also hiding post-onboarding).
Completion banner copy updated: "Step 1, 2 & 3 done — Claude Code
installed, auto-mode set, Agnes ready". Dashboard CTA partial and
other templates don't reference step numbers for this flow, so no
adaptation needed there.
* Simplify /home Step 2 to Shift+Tab only — drop the JSON snippet
Operator pointed out two issues with the prior Step 2:
1. The settings.json snippet is redundant. Claude Code's first
Shift+Tab cycle to auto-accept mode already prompts the user
whether to persist it as default — Claude writes the config
itself, no manual file edit needed.
2. The snippet only showed the POSIX path `~/.claude/settings.json`,
which doesn't translate to native Windows.
Replace the snippet + copy button with a plain Shift+Tab instruction,
explicitly call out the first-time "make this the default?" prompt,
and note that Claude handles the config write itself — same flow on
macOS / Linux / WSL / Windows. Adds a fallback line for users who
already closed the post-OAuth session.
* Tighten /home Step 2 install-note to two paragraphs
Operator: drop the 'Claude writes the setting itself, so this works
the same on macOS / Linux / WSL / Windows...' line plus the
'auto-approves file edits going forward; Bash commands stay gated
— that's the safe default' line. Both were filler — the make-default
prompt already implies persistence, and gated Bash is the obvious
default users won't be surprised by.
Result: paragraph 1 carries Shift+Tab + first-time make-default
say-yes + closed-session fallback in one breath; paragraph 2 keeps
the verbatim YOLO link. Same affordances, less vertical space.
* Capture session paths via SessionStart hook + lock parallel pushes
Replace the encoding-based scan of ~/.claude/projects/<encoded-cwd>/ with
a queue file populated by a new `agnes capture-session` SessionStart hook.
The hook reads the documented `transcript_path` field from Claude Code's
hook stdin JSON, sidestepping the cwd-to-folder encoding (which is an
internal implementation detail and varies by Claude Code version).
- New `agnes capture-session` subcommand appends transcript_path to
<workspace>/.claude/agnes-sessions.txt. Silent on all malformed input
so a hook chain failure doesn't clutter Claude Code startup.
- `agnes push` now consumes the queue: atomic snapshot rename guards
against hooks writing during the push window, successful uploads land
in agnes-sessions-uploaded.txt (TSV: timestamp + path), failed paths
are requeued.
- Cross-platform single-instance lock via the filelock package (fcntl
on POSIX, msvcrt on Windows). Concurrent SessionEnd hooks — common
when the user closes several sessions at once — silent-exit on the
losing side instead of all racing the upload.
- Recovery: pre-existing snapshot files from a crashed push are picked
up and processed before the live queue.
- The SessionStart `agnes push` self-heal entry is dropped — it became
redundant once the queue persists across runs (orphans from headless /
crashed sessions ship out on the next interactive SessionEnd push).
Existing workspaces auto-migrate via the marker-based replace logic.
- Legacy encoding scan stays available behind `--legacy-scan` for one-
off backfills of sessions predating the queue.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Add /agnes-private + statusLine indicator for private sessions
Users handling sensitive data inside Claude Code can now opt a session
out of the Agnes upload pipeline, either proactively (right after session
start) or reactively (mid-session). The `/agnes-private` slash command
runs `agnes mark-private` deterministically via `!`-prefix direct bash —
no AI in the loop. A workspace-installed statusLine surfaces a
`🔒 agnes-private` indicator in Claude Code's status bar so the user
sees the state at a glance.
Authoritative source of "do not upload" is a separate file
`<workspace>/.claude/agnes-sessions-private.txt` (one session_id per
line). Both `capture-session` (queue writer) and `push` (queue reader)
consult the list. This makes the slash-command / SessionStart-hook race
impossible by construction: whichever runs first, the session is correctly
filtered out.
- `agnes mark-private` reads `CLAUDE_CODE_SESSION_ID` from env (set by
Claude Code in every bash subprocess it spawns — stable documented API)
and appends to the private list.
- `agnes statusline` reads the session JSON Claude Code pipes on stdin,
checks the private list, and emits the indicator or nothing. Optimized
for the high call frequency of statusLine renders.
- `capture-session` extracts session_id from hook stdin and skips queue
write when the ID is already on the private list (race protection).
- `push` filters snapshot entries by the private list and appends to a
per-workspace audit log `agnes-sessions-private-skipped.txt`.
- Queue format migrated from `<path>` to `<session_id>\t<path>`; legacy
one-column lines still parse (empty session_id, still upload, can't be
marked private retroactively — fine, they pre-date the feature).
- `install_claude_hooks` writes a workspace statusLine unless the user
already has a custom one (warn + preserve). Idempotent re-init.
- `install_claude_commands` ships `agnes-private.md` alongside
`update-agnes-plugins.md`. Per-template fallback so a missing template
doesn't get clobbered with the wrong content.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Fix setup-prompt + CLAUDE.md marketplace copy + drop skills step
Three issues against the post-PR-#240 / post-PR-#237 state:
1. Setup prompt's marketplace block trailer (both has-stack and
empty-stack variants) claimed the SessionStart hook keeps the
marketplace clone in sync via `agnes refresh-marketplace --quiet`
on every session and that admin grants land automatically — both
false since PR #237 (0.47.x) moved the install/update path out of
the hook into the `/update-agnes-plugins` slash command. The hook
is `--check`-only: detects server-side changes, prompts the user
to run the slash command, which does the full reconcile
interactively with output visible in the transcript.
2. The empty-stack variant framed composition as "admin grants only",
missing the actual three-source served stack:
(admin RBAC ∩ /marketplace subscriptions)
∪ system-mandatory plugins (admin-pinned, auto-applied)
∪ Flea market installs (skills/agents bundled, plugins standalone)
Updated copy spells out all three sources so analysts know where
their stack picks live, and what the SessionStart hook actually
does on change detection.
3. CLAUDE.md template's "Agnes Marketplace" section conflated
eligibility (`resolve_allowed_plugins` — what's listed) with served
stack (`resolve_user_marketplace` — what actually reaches Claude
Code). The two are different: a user can be RBAC-eligible for a
plugin without having subscribed to it on /marketplace. Rewrote
the section to distinguish the eligibility set from the served
stack and to describe the `--check`-only hook accurately.
Plus: deleted the setup prompt's interactive Skills step (final step
before Confirm). The named-opinion question — "do you want me to
bulk-copy every skill into ~/.claude/skills/agnes/ or pull on-demand
via `agnes skills show <name>`?" — had no obvious right answer for
new users at the tail end of a wall of technical steps. On-demand
lookup is the one-size-fits-all default; `agnes skills list/show`
remain discoverable and the CLAUDE.md template references specific
skills inline (e.g. agnes-data-querying in the BigQuery section)
where they're relevant. Layout: Confirm shifts from step 9 to step 8.
Tests updated, full setup/marketplace/welcome surface green (115
passed). Remaining full-suite failures are pre-existing (BQ/Keboola
fixtures, Windows charmap collection error in test_v26_keboola_e2e)
— verified against a clean stash, unrelated to this diff.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
* Fix session-queue race + snapshot PID-reuse data loss
Two blocker fixes from the PR #242 review:
1. Concurrent SessionStart hooks could corrupt the queue file on
Windows. Python's `open(path, "a")` is not atomic there — the CRT
does not pass FILE_APPEND_DATA to CreateFile, so concurrent
appenders (user opening several Claude Code windows simultaneously)
could interleave bytes mid-line. The malformed lines then silently
fail the parser and the entries are dropped.
Fix: wrap append_to_queue, requeue_failed, and snapshot_queue in a
short-lived FileLock on a dedicated `agnes-queue.lock`. Separate
from `agnes-push.lock` so capture-session hooks don't block on the
push command. New test_append_concurrent_threads_no_corruption
reproduces the race with 4 threads x 50 appends.
2. Snapshot filenames embedded only the PID (`agnes-sessions.snapshot.
<PID>.txt`). After a crashed push left a snapshot on disk and the
OS recycled the PID for a new push, `os.rename` would atomically
overwrite the recovery snapshot — every entry in it lost, silently.
Fix: append a uuid8 hex tail (`agnes-sessions.snapshot.<PID>.
<uuid8>.txt`). find_recovery_snapshots already globs the prefix
so it picks up both old and new format. New
test_snapshot_filename_is_unique_per_call asserts two consecutive
snapshots under the same PID don't collide.
Targeted tests green (47/47 in session_queue/capture_session/cli_push).
Full suite failures unchanged from baseline (pre-existing BQ/Keboola
fixture issues per CLAUDE.md).
* Auto-refresh workspace hooks + bash-wrap all hook entries (Windows)
Fixes from PR #242 second review (ZdenekSrotyr):
1. `uv.lock` regenerated to include `filelock 3.29.0` (declared in
pyproject.toml but missing from the lock file — CI's
lockfile-consistency check would fail; `uv pip install` on a clean
cache would silently miss the dep).
2. `agnes self-upgrade` now auto-refreshes the workspace Claude Code
hooks via the new `cli.lib.hooks.maybe_refresh_claude_hooks`. Closes
the silent-stop migration gap: a v0.48 workspace would auto-upgrade
the CLI from its existing SessionStart self-upgrade entry but never
pick up the new `agnes capture-session` SessionStart hook, leaving
the queue empty and `agnes push` uploading nothing.
The refresh fires on both the "info is None" fast path (CLI already
current — catches the second SessionStart after a prior upgrade)
and the install-success path. Guarded by `workspace_has_agnes_hooks`
so it never writes `.claude/settings.json` into directories that
aren't Agnes workspaces (e.g. `agnes self-upgrade` invoked from
`~/`). Errors are surfaced on stderr but never flip the upgrade exit
code.
3. All Agnes-managed hooks are now wrapped in `bash -c "..."`. The
self-upgrade+pull chained SessionStart entry was the only one still
shipping unwrapped — Claude Code on Windows runs hook commands
directly without a shell, so the `;` chain + `2>/dev/null` +
`|| true` shell syntax silently no-op'd on native Windows installs
without Git Bash on PATH. Workspaces still on the old form
auto-upgrade via the refresh path above.
Tests: +12 in test_lib_hooks.py (guard semantics, v0.48→v0.49
migration end-to-end, third-party-hook preservation, bash-wrap
invariant). +5 in test_self_upgrade.py (refresh fires on info=None,
fires on install success, skipped on failure, skipped on --check-only,
refresh failure never flips exit code).
130 targeted tests green. The 2 pre-existing Windows path-separator
failures in `test_smoke_test_detects_version_mismatch[uv|pip]` are
unrelated (path mismatch `\fake\uv\bin\agnes` vs `/fake/uv/bin/agnes`
in test asserts, pre-PR baseline).
* CHANGELOG: document PR-242 main features
Closes ZdenekSrotyr #4: the [Unreleased] block was missing entries for
the PR's primary surface — only the post-merge fix bullets and the
unrelated setup-prompt copy change were captured. Adds:
- ### Added: 6 bullets covering the session capture queue + new
`agnes capture-session` subcommand, `/agnes-private` slash + `agnes
mark-private`, `agnes statusline` + statusLine wiring, `--legacy-scan`
opt-in fallback, single-instance push lock, and the new `filelock`
runtime dep.
- ### Changed: BREAKING bullet on the SessionStart / SessionEnd hook
wire format change (capture-session as first SessionStart entry,
push self-heal removed, SessionEnd push detached via nohup, all
entries bash-wrapped). Folds the prior standalone bash-wrap bullet
into this consolidated entry — Z's review flagged the layout shift
as BREAKING, and grouping the related sub-changes makes the
migration story readable in one place.
- Operator migration is auto-handled by `maybe_refresh_claude_hooks`
invoked from `agnes self-upgrade` (separate Changed entry below).
No `agnes init` re-run required. Pre-queue session jsonls on
upgrading workspaces still need a one-off `agnes push --legacy-scan`
— flagged in the BREAKING bullet.
No code change; doc only.
* Drop permanent 4xx uploads instead of requeueing forever
Closes ZdenekSrotyr #5. Previously the push retry path requeued any
non-200 response except the literal "file not found on disk", so 401
(token expired), 403 (RBAC denial), 413 (payload too large), 400
(server-side validation) cycled through every push run forever — the
queue grew without bound and each run re-bombarded the server with the
same deterministically-failing upload.
Now 4xx (except 408 Request Timeout + 429 Too Many Requests, which the
HTTP spec marks as transient) is dropped and audit-logged to
`<workspace>/.claude/agnes-sessions-failed.txt`:
<iso_ts>\t<session_id>\t<status>\t<transcript_path>
5xx and network errors continue to requeue — those reflect server /
transport state that can change between runs, so retry is the right
behavior.
The audit log piggybacks on the push single-instance lock
(agnes-push.lock) — push is the only writer to this file, same as the
existing `mark_uploaded` and `mark_private_skipped` paths, so no
separate filelock is needed.
`agnes push --json` surfaces a new `dropped_permanent` counter; non-
quiet stdout mentions the audit-log path so operators tailing the
output have a pointer to the forensic trail.
Tests: +7 in test_cli_push.py (401/400/403/413 → drop; 408/429 →
requeue; 500/502/503 → requeue; network exception → requeue;
--json `dropped_permanent` counter; stdout audit-log pointer). +1 in
test_session_queue.py (mark_failed_permanent TSV format).
127/129 targeted tests green. The 2 pre-existing Windows
path-separator failures in `test_smoke_test_detects_version_mismatch
[uv|pip]` are unrelated (path mismatch `\fake\uv\bin\agnes` vs
`/fake/uv/bin/agnes` in test asserts, pre-PR baseline).
* Catch OSError in push lock acquisition
Closes ZdenekSrotyr #8. `acquire_or_skip` in `cli/lib/push_lock.py`
previously caught only `filelock.Timeout`. Any `OSError` from
`FileLock.acquire` — read-only filesystem, permission denied on
`.claude/`, disk full, hardware I/O failure — propagated as an
unhandled traceback.
Two visible failure modes:
- SessionEnd hook: `|| true` in the wrapper swallowed the error, so
daily pushes silently never ran. Operator had no signal.
- Manual `agnes push`: ugly Python traceback dumped to the terminal
instead of a clean exit.
Now `OSError` is treated the same as `Timeout` — yield `None`, caller
returns cleanly with rc=0. The operator's environment in these
scenarios has bigger problems than missing session uploads, so we
swallow rather than retry-loop or surface a noisy warning.
Test: `test_push_silent_exit_when_filelock_raises_oserror` patches
the `FileLock` used inside `push_lock` to raise OSError on acquire,
verifies push exits 0 with no traceback and the queue is preserved
for the next attempt.
* Address remaining S2 items from PR-242 review
Four items from ZdenekSrotyr's S2 list:
S2.10 — `_install_statusline` truthy check (cli/lib/hooks.py): replace
`if existing:` with explicit `if existing is None or existing == "":`.
Documents and tests the behavior for both edge cases (explicit-null
and empty-string `statusLine`) — both treated as "not configured"
rather than "explicit user opt-out", so we install ours. Two new
tests in test_lib_hooks.py pin the contract.
S2.6 — onboarding docs for /agnes-private. New "Private sessions"
subsection in `config/claude_md_template.txt` (next to Data Sync)
covering the slash command, statusbar indicator, and audit-log
location. One-line tip in `app/web/setup_instructions.py` so the
feature is discoverable at onboarding.
S2.9 — e2e privacy test (tests/test_e2e_privacy.py). Wires
capture_session → mark_private → push against a recording fake
api_post and asserts zero session uploads for the marked one.
Three cases: mark-before-capture (queue write skipped),
mark-after-capture (push-side filter catches it + audit-logs),
control (unmarked sessions upload normally).
David #8 — `--legacy-scan` help text now documents the
private-list gap (legacy entries carry empty session_id, so
the filter is not consulted). The practical impact is bounded —
pre-queue sessions cannot have been marked private since the
private list is a queue-era feature — but the disclaimer in the
help text means an operator running a backfill is not surprised.
68 targeted tests green (3 new e2e + 2 new truthy edge tests +
existing). 2 pre-existing Windows path-separator failures in
test_smoke_test_detects_version_mismatch[uv|pip] unchanged.
Remaining S2 items (statusline mkdir push-back, capture-session
silent-fail follow-up) handled in PR comment + follow-up issue
respectively.
* Address remaining S2 follow-ups (David #8, S2.7, David #11)
Three items left over from Mina's bbf63472 batch — that commit
addressed S2.6/S2.9/S2.10 + documented David #8 in help text but
deferred the actual implementations of S2.7, David #11, and the real
David #8 fix to follow-ups. This commit closes them.
David #8 — `agnes push --legacy-scan` now consults the private list.
Claude Code names jsonls `<session-id>.jsonl`, so the file stem IS
the session id; the legacy-scan path can apply the same private filter
the queue path uses. Both the dry-run and live-upload code paths fixed.
Help text updated (no longer warns the filter is bypassed). Two new
tests in test_cli_push.py cover the upload-skip path + the dry-run
`would_skip_private` segregation.
S2.7 — `statusline`/`is_private` no longer mkdir-pollutes arbitrary
workdirs. Split `_claude_dir` into `_claude_dir_writable` (used only
from `add_private`) and `_claude_dir_readonly` (no mkdir). The
read-only public helpers (`private_list_path`, `read_all_private`,
`is_private`) compose the no-mkdir variant by default; `add_private`
opts in via `writable=True`. Added a process-local mtime-keyed cache
around `read_all_private` so in-process callers (push doing one stat
per upload candidate, future `agnes diagnose`) don't re-parse the
file on every check. Cache eviction on `add_private` so a sub-second
write+read sequence doesn't see stale data even on coarse-mtime
filesystems. Two new tests pin the no-mkdir contract + the
in-same-second add+read consistency.
David #11 — `agnes capture-session` writes a breadcrumb log on every
invocation. New `<workspace>/.claude/agnes-capture-session.log` TSV:
`<iso_ts>\t<outcome>\t<detail>` where outcome covers every silent-
exit path (`ok`, `private_skip`, `empty_stdin`, `bad_json`,
`not_object`, `no_transcript_path`, `stdin_read_error`,
`write_error`). Gives operators a signal to detect "hook fires but
queue stays empty" — without it, an upstream Claude Code stdin-
contract change is invisible because the hook always exits 0. Log
rolls at 256 KiB so it doesn't grow unbounded on long-lived
workspaces. Best-effort: a breadcrumb-write failure is itself
swallowed so the hook contract stays "exit 0 always". Skipped in
non-Agnes workdirs (no `.claude/` exists) so opening Claude Code
in `~/` doesn't pollute it. Five new tests in test_capture_session.py
cover the success / bad_json / no_transcript_path / private_skip /
no-pollute paths.
115 targeted tests green (test_cli_push, test_capture_session,
test_private_list, test_session_queue, test_e2e_privacy,
test_lib_hooks, test_statusline, test_mark_private).
---------
Co-authored-by: Minas Arustamyan <arustamyan.minas@gmail.com>
Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Co-authored-by: ZdenekSrotyr <zdenek.srotyr@keboola.com>
* Setup-prompt + bootstrap fixes from David's 2026-05-10 init report
Three issues from clean-machine bootstrap evidence:
1. `agnes refresh-marketplace --bootstrap` failed to recover when the
local clone existed but Claude Code's marketplace registry had lost
the `agnes` entry. Bootstrap path now parses
`claude plugin marketplace list`, re-runs
`claude plugin marketplace add ~/.agnes/marketplace` when missing,
and treats `add` failures as fatal (was warn-and-continue, root cause
of the cascade into "Marketplace 'agnes' not found" plugin install
errors).
2. Setup prompt now always emits the marketplace-registration block,
even when the operator has zero plugin grants. Pre-wires the
SessionStart hook so future admin grants land automatically without
re-running setup. Block copy adapts: empty list shows
"no plugins granted yet", populated list shows "install plugins".
3. Setup prompt registers the Atlassian Remote MCP server unattended
(`claude mcp add --transport sse atlassian
https://mcp.atlassian.com/v1/sse`). Hosted Remote MCP, OAuth handled
automatically by Claude Code on first use. Asana / GWS stay on the
/home connector cards (PAT/keychain flows don't fit unattended
bootstrap).
Confirm step nudges the user toward the /home connector cards for the
PAT-flow services. CLAUDE.md template renames the marketplace section
to "Agnes Marketplace" and documents that all plugins are addressed as
`<plugin>@agnes` regardless of upstream slug.
Layout: Confirm shifts from step 6/8 to step 9 across all variants
(preflight, marketplace, MCP all unconditional). Tests updated.
* Link Claude license options from /home install pane
Step-1 Claude install on /home pointed users to OAuth without
explaining what to do if they don't have a Pro/Max subscription. Add
a one-line follow-up link to the plan-tier section on /setup-advanced
(new `#claude-plan` anchor) so first-time users discover the
subscription tiers rather than bouncing on the OAuth screen.
* Add idempotent + no-TLS-bypass guardrails to /home connector prompts
The Asana / Google Workspace / Atlassian connector prompts on /home
already shipped a precheck step that short-circuits when the service
is already wired, but they didn't carry the same idempotency +
surface-errors-verbatim + don't-disable-TLS-verification guardrails
the bash bootstrap prompt has. Add a one-paragraph 'Ground rules'
block at the top of each prompt so a connector failure doesn't
tempt the model into bypass workarounds, matching the same posture
David's 2026-05-10 init report flagged for the bash flow.
* skip Source: lines in marketplace registry detector
`claude plugin marketplace list` prints a `Source: <local path>` line
under each registered marketplace; the local clone almost always lives
under a path containing the marketplace name itself
(`~/.agnes/marketplace`). A naive \\bagnes\\b match over the full
stdout therefore false-positives whenever ANY unrelated marketplace
sits under `~/.agnes-…/` or similar. Filter Source: lines out before
matching so the recovery path actually re-adds when needed instead of
silently falling through to a broken `marketplace update agnes`.
Adds regression test covering the substring-only case.
* drop customer-specific tokens from CHANGELOG entries
Per CLAUDE.md vendor-agnostic OSS rule ("nothing customer-specific
... in changelogs"):
- "agnes-vrysanek.groupondev.com" -> "a private-CA Agnes deployment"
- "Groupon Marketplace / groupon-marketplace" -> "<Org> Marketplace /
<org>-marketplace" (placeholder example)
- Removed "David flagged" attribution language; init-report context
stays intact, just stripped of the named host + brand
---------
Co-authored-by: ZdenekSrotyr <zdenek.srotyr@keboola.com>
* Add /marketplace browse page + Model B opt-in stack composition
New /marketplace browse surface unifies the curated marketplaces
(admin-managed git mirrors) and the community Flea Market behind
three tabs — Curated / Flea / My Stack — with per-tab category
filter, search across both sources with scope checkboxes, and
numeric pagination, all driven by URL query state. Plugin detail
at /marketplace/curated/<slug>/<plugin> and /marketplace/flea/<id>;
nested skill / agent detail at /marketplace/curated/<slug>/<plugin>/
{skill,agent}/<name> and the flea-side single-page detail.
Model B opt-in: an RBAC grant on a curated plugin is now only
*eligibility*. The user must click "Add to my stack" for it to
enter their served Claude Code marketplace. Composition flips
from (rbac ∖ opt_outs) ∪ store_installs to
(rbac ∩ subscriptions) ∪ store_installs. The legacy
user_plugin_optouts table is renamed user_curated_subscriptions
(schema v27) — same table shape, inverted semantic, repository
methods become subscribe / unsubscribe / is_subscribed.
UX vocabulary: Install → Add to my stack, Installed → In your
stack, card "Installed" badge → "In stack" (amber pill), tab
"My Subscriptions" → "My Stack". Bridges the two-step model
(server-side bookmark vs. on-laptop install) the previous label
hid. Click triggers an inline post-add hint panel under the
description with the agnes refresh-marketplace recipe + Copy
chip, dismissible per-browser via localStorage.
Per-tab info blocks above the filter row:
- Curated: trust signal — "Each plugin here has a named curator
accountable for it." (blue accent + See-all-curators link)
- Flea: open-shelf signal — "Anyone in the company can upload
here." (purple accent + Tips-for-sharing link)
- My Stack: personal-shelf orientation — "Your AI stack —
everything you've added." (slate accent, no link)
Tabs carry per-tab Heroicons (shield-check / building-storefront
/ rectangle-stack) tinted to match each tab's accent; flips white
when the tab is active for contrast.
Hero illustration anchored to the right of the blue hero panel
(absolute, 47% wide, behind the search row content). Hidden
under 900px viewport.
Action-row CTAs realigned to publication intent: curated
"How to add new content" → "Submit a plugin" (links to the
guide page); flea button removed since +Upload sits next to it.
Empty-state CTAs match. /marketplace/guide/{curated,flea}
routes now host publication-flow guide pages with placeholder
ledes — full copy to be authored separately.
Categories: Heroicons-based icons mapped per category in
src/category_icons.py (zero new dependencies; SVG path strings
inlined). Marketplace cards, filter pills, and detail pages
read from the same source.
API endpoints under /api/marketplace:
- GET /items per-tab listing (curated / flea / my)
- GET /categories per-tab non-zero counts
- GET /curated/{slug}/{plugin} plugin detail
- POST/DELETE /curated/{slug}/{plugin}/install subscribe toggle
- GET /curated/{slug}/{plugin}/{skill,agent}/{name} inner item
The tab=my branch reads directly from
user_curated_subscriptions ∪ user_store_installs (not
resolve_user_marketplace, which bundles flea skills/agents into
a single store-bundle synthetic entry useful for serving the
Claude Code marketplace ZIP/git but wrong for browsing where
each item should appear as its own card).
Detail pages: plugin detail surfaces inner skills/agents as
clickable nested cards; commands/hooks/MCPs render as plain
name lists. Skill/agent detail mirrors the plugin layout with
kind-tinted accents (skill = green, agent = purple), Description
+ Details sidebar, Files + Docs sections, and the "How to call
it" copy-able invocation chip showing /<plugin>:<inner-name>
exactly as Claude Code namespaces it post-install. Curated
nested has no install button — links back to the parent plugin.
Navbar: standalone "My AI Stack" relabelled "My Stack" and
points at /marketplace?tab=my; "Store" link removed (Store
flow is reachable via the Flea Market tab's +Upload button).
The standalone /my-ai-stack and /store routes still work for
old bookmarks.
Tests cover the new browse / categories / install / RBAC paths
under tests/test_marketplace_api.py; existing marketplace and
store tests updated for Model B (explicit subscribe in fixtures).
Schema bumped v26 → v27 with idempotent migration that wipes
existing user_plugin_optouts rows on flip and adds
marketplace_plugins.created_at with registered_at backfill.
* Fix v28 migration + post-rebase test fallout
v28 ALTER TABLE marketplace_plugins ADD COLUMN created_at conflicted with
_SYSTEM_SCHEMA's earlier CREATE that already includes the column on fresh
installs (test fixtures starting at any pre-v28 version trip on it).
Switch to ADD COLUMN IF NOT EXISTS — same idiom as the upstream v27
Keboola sync-strategy migration on the same ladder.
Two test patches needed after the rebase bumped SCHEMA_VERSION 27 → 28:
- test_keboola_v27_migration.py: test_schema_version_constant_is_27 was
pinning ==27. Loosened to >=27 (the test's purpose is to verify the
v27 Keboola migration, not to pin the current SCHEMA_VERSION).
- test_setup_page_unified.py: was monkeypatching resolve_allowed_plugins
but compute_default_agent_prompt now reads from resolve_user_marketplace
(Model B-aware). Stub the right function so the test exercises the
v28 served-set path.
* Harden curated skill/agent inner endpoints against path traversal
`_read_inner`, the `skill_dir` walk in `curated_skill_detail`, and the
`agent_path.stat` in `curated_agent_detail` joined URL path-params onto
`plugin_root` without verifying the resolved candidate stayed inside it.
Starlette's `[^/]+` on `{skill_name}` / `{agent_name}` blocks the direct
URL exploit (encoded `/` 404s before the handler), but a curator-planted
symlink inside a curated marketplace's git mirror could still dereference
outside the plugin tree on read.
Adds `_safe_join(plugin_root, *parts)` doing
`Path.resolve(strict=True)` + `relative_to(plugin_root.resolve())`, used
by all three call sites so the boundary is enforced once and consistently.
Tests cover the helper directly (normal path resolves, escaping `..`
returns None, escaping symlink returns None, missing file returns None)
plus an end-to-end check that the symlink case actually 404s on the
HTTP endpoint. Symlink tests skip on Windows where symlink creation
needs elevated permissions; they run on Linux CI.
---------
Co-authored-by: Minas Arustamyan <arustamyan.minas@gmail.com>
Adds end-to-end flow for installing and keeping the per-user filtered
Claude Code marketplace in sync with the user's Agnes stack
(admin RBAC grants \ MyAIStack opt-outs U /store installs).
Setup (one-liner in install prompt step 5):
`agnes refresh-marketplace --bootstrap` clones the per-user marketplace
bare repo to ~/.agnes/marketplace, strips PAT from the cloned origin
URL, registers the local path with Claude Code, and installs every
plugin in the served manifest at --scope project. Replaces a 15-line
inline shell sequence that tripped Claude Code's agent-driven `rm -rf`
permission gate.
Auto-refresh (SessionStart hook installed by `agnes init`):
`agnes refresh-marketplace --quiet` runs every Claude Code session,
fetches+resets the clone (server rebuilds as orphan commits, so
pull --ff-only is impossible), and version-aware reconciles:
- missing in workspace -> claude plugin install <name>@agnes --scope project
- version differs -> claude plugin update <name>@agnes
- matches -> skip
Don't auto-uninstall plugins that disappeared from the manifest --
a transient empty manifest from the server would wipe the stack.
Hook output: when --quiet AND something actually changed, emits Claude
Code hook JSON on stdout -- `systemMessage` (transient toast) and
`hookSpecificOutput.additionalContext` (model-side system reminder),
both carrying the change summary plus a "/exit + restart Claude Code"
instruction (Claude only scans plugins at session start).
Windows hook compatibility: the refresh-marketplace hook command is
wrapped in `bash -c "..."` because Claude Code on Windows runs hook
commands directly without invoking a shell, so `2>/dev/null || true`
would otherwise be passed as literal argv tokens.
Cross-cutting:
- cli/lib/marketplace.py: shared CLONE_DIR + MARKETPLACE_NAME constants.
- cli/lib/hooks.py: SessionStart now has two independent entries
(pull + refresh-marketplace) so a failure in one doesn't suppress
the other; legacy `da sync` and prior single-pull layouts upgrade
cleanly on re-init.
- PAT injection on every git fetch via per-invocation credential
helper (token in \$AGNES_TOKEN env, never in argv or .git/config).
- Pre-snapshot of installed plugins captured BEFORE
`claude plugin marketplace update` so silent auto-applied version
bumps still fire notifications.
- scripts/dev/agnes-client-reset.sh: cleans ~/.claude/plugins/marketplaces/agnes,
~/.claude/plugins/cache/agnes, drops uv build cache, documents
workspace-scoped residue that can't be enumerated from the script.
- app/web/setup_instructions.py: legacy AGNES_DEBUG_AUTH path also
uses clone (direct HTTPS marketplace add is broken end-to-end on
every Claude Code distribution -- stores response as single file,
plugin source paths then 404).
28 new tests (test_cli_refresh_marketplace.py) + extended hook + setup
template tests cover bootstrap, fetch+reset ordering, version-aware
reconcile, project-path filtering, hook JSON shape, and the bash-c
Windows wrapper invariant.
The `/setup` route no longer accepts `?role=analyst|admin`. The route
signature drops the `Literal[...] = Query(...)` parameter and the
silent admin-downgrade block (`if role == "admin" and not is_admin:
role = "analyst"`). The `role` ctx variable threaded into install.html
also goes away — Task 6 cleans up the template's role-tile UI and the
JS PAT-mint ternary.
`?role=` is silently ignored by FastAPI for unknown query params, so
existing bookmarks (none in production — the param was added in this
PR and never shipped) just degrade to the unified layout. No
RedirectResponse shim needed.
Tests: drop the entire `tests/test_setup_page_roles.py` file (eight
role-branching tests that no longer apply) and add
`tests/test_setup_page_unified.py` with three tests:
- `test_setup_page_renders_unified_layout`
- `test_setup_page_ignores_role_query_param`
- `test_setup_page_renders_marketplace_for_user_with_grants`
- `test_install_legacy_path_redirects_to_setup`
Also replace the role-aware `test_install_preview_*` tests in
test_web_ui.py with unified-layout assertions.
Plan: docs/superpowers/plans/2026-05-04-unified-setup-prompt.md task 5.
Vojtech