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7 commits

Author SHA1 Message Date
ZdenekSrotyr
9d0e4e687d refactor(bq): #160 remove legacy_wrap_views config knob (always-wrap)
Now that VIEW/MATERIALIZED_VIEW always wrap via bigquery_query() (the
prior `legacy_wrap_views=True` branch behavior, made unconditional in
the previous commit), the toggle has no semantic meaning and is removed
across the codebase.

Production code:
- app/api/admin.py: drop the field from _OPTIONAL_FIELDS["data_source"]
  ["bigquery"]["fields"] and from _BQ_OPTIONAL_FIELD_DEFAULTS, plus the
  comment block above the defaults dict.
- config/instance.yaml.example: drop the example snippet.
- src/orchestrator.py: update the inner-objects skip-branch comment to
  reflect the new BQ behavior (the skip itself stays — keboola
  use_extension=False still inserts _meta rows without inner views).
- app/web/templates/admin_tables.html: rewrite operator copy in the
  register and edit forms to reflect always-wrap.

Tests:
- tests/test_admin_server_config.py (TestServerConfigBigQueryFields):
  flip assertions from "field IS present" to "field NOT present" on
  legacy_wrap_views. Drop the test_post_persists_legacy_wrap_views test
  since the field no longer exists.
- tests/test_admin_server_config_known_fields.py: same flip on the
  known-fields registry assertion.
- tests/test_bigquery_extractor.py: drop the obsolete
  test_view_entity_does_not_create_master_view_by_default (asserted the
  bug we fixed) and test_legacy_wrap_views_toggle_restores_old_behavior
  (toggle no longer meaningful). Update remaining test docstrings.

Operators with `legacy_wrap_views: true` set in their overlay get the
new (equivalent) behavior automatically — the unrecognized key is
silently ignored by the YAML loader. Operators with `false` get the
issue-#160 fix as a behavior change, not a regression.

Spec gate updated: production code grep gate
  grep -rn 'legacy_wrap_views' connectors app src config cli
must return zero. tests/ excluded — historical "removed in #160"
breadcrumbs and `assert "X" not in fields` regression guards retained
as anti-regression signals.
2026-05-04 10:31:35 +02:00
ZdenekSrotyr
10d7bd62f8 fix(bq): #160 wrap views via bigquery_query() for VIEW/MATERIALIZED_VIEW
Issue #160: da query --remote against query_mode='remote' BQ rows whose
underlying entity is a VIEW or MATERIALIZED_VIEW returned a DuckDB catalog
error because the extractor (with legacy_wrap_views=False default since
the v2 fetch primitives release) skipped master-view creation for those
entity types — but kept inserting the _meta row, leaving operators with a
registered name that resolves to nothing.

Always create a master view for entity types we have proven runtime support
for in this codebase:

  BASE TABLE          → bq."<dataset>"."<source_table>"
                        (Storage Read API path; predicate pushdown)
  VIEW / MAT_VIEW     → bigquery_query('<project>', 'SELECT * FROM `proj.ds.tbl`')
                        (jobs API path; no pushdown — the upcoming /api/query
                        cost guardrail bounds the scan; was the legacy
                        legacy_wrap_views=True branch SQL form, just always-on)

For other entity types (EXTERNAL, SNAPSHOT, CLONE, future), log a warning
and SKIP both the master view AND the _meta row. The registry row remains
intact so /api/v2/scan still works for `da fetch`; we just don't expose a
stale _meta entry that the orchestrator would later strand.

The legacy_wrap_views config knob is still readable in this commit (read
returns the value, which is then ignored). Removal across the rest of
the codebase happens in the follow-up REFACTOR commit.

tests/test_bigquery_extractor.py:
- Add 3 RED tests covering the new always-wrap behavior:
  test_view_creates_wrap_view_with_default_config,
  test_materialized_view_creates_wrap_view_with_default_config,
  test_unsupported_entity_type_skips_meta_and_view.
- Fix pre-existing flakiness in test_main_exits_when_project_missing
  by resetting app.instance_config cache before the no-project mock —
  the prior test populates the cache with a project, and removing the
  legacy_wrap_views get_value() call surfaced this latent ordering bug.
2026-05-04 10:31:35 +02:00
ZdenekSrotyr
61f6b8d2d5
feat(ci+tests): deploy safety audit — linting, rollback, smoke tests, 50+ new tests (#120)
Comprehensive deploy safety audit implementing 19 improvements across CI/CD pipeline, test coverage, and source code.

### CI/CD Pipeline
- ruff + mypy added to both release.yml and keboola-deploy.yml (continue-on-error)
- Smoke test added to keboola-deploy.yml (was missing)
- Automatic rollback on smoke test failure in release.yml
- Expanded smoke-test.sh with catalog, admin/tables, marketplace.zip, metrics
- Required status checks via .github/settings.yml
- Dependabot + CODEOWNERS + pre-commit hooks + ruff config

### Source Code
- DB schema version check in /api/health (db_schema: ok/mismatch/unhealthy)
- Config versioning (config_version: 1 in instance.yaml, non-blocking validation)
- BigQuery extractor ATTACH error handling (try/except around INSTALL+ATTACH)
- Post-deploy smoke test script for prod VM validation

### Test Coverage (~50 new tests)
- v13->v14 migration, Email magic link TTL, PAT, Marketplace ZIP/Git,
  Jira webhooks, Hybrid Query BQ, Keboola/BQ extractor failure modes,
  Orchestrator failure modes

Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
2026-04-29 09:18:55 +02:00
ZdenekSrotyr
2e1dfb7553
feat(v2): claude-driven fetch primitives + 0.14.0 (#102)
Replaces the BigQuery wrap-view pattern with a discovery + scoped-fetch toolkit driven by the analyst's Claude session. Adds /api/v2/{catalog,schema,sample,scan,scan/estimate}, da catalog/schema/describe/fetch/snapshot/disk-info CLI commands, sqlglot-backed WHERE validator, process-local quota tracker, agent rails skill (cli/skills/agnes-data-querying.md). BREAKING: BQ wrap views off by default — set data_source.bigquery.legacy_wrap_views=true for one cycle. Backward-compat field_validator on primary_key. Catalog cache now matches documented 300s TTL with RBAC fresh per request. Cuts release v0.14.0.
2026-04-29 01:07:19 +02:00
ZdenekSrotyr
53a9e838f9 feat: add graceful shutdown handler
- Add close_system_db() function in src/db.py to cleanly close shared DB connection
- Add lifespan context manager in app/main.py to trigger shutdown on app exit
- Integrate lifespan into FastAPI app initialization
- All API tests pass (77/77)
2026-04-09 07:03:45 +02:00
ZdenekSrotyr
3ba207a7f8 feat: add _remote_attach to BigQuery extractor, support token-less ATTACH in orchestrator
BigQuery extension handles auth via GOOGLE_APPLICATION_CREDENTIALS env var,
so _remote_attach uses empty token_env. Orchestrator now supports both
token-based (Keboola) and env-based (BigQuery) authentication modes.
2026-04-08 18:13:31 +02:00
ZdenekSrotyr
18e5f0b6e8 feat: implement extract.duckdb contract — orchestrator + extractors
Phase 0: extend table_registry schema (v1→v2 migration), add
source_type/bucket/source_table/query_mode columns.

Phase 1: SyncOrchestrator ATTACHes extract.duckdb files into master
analytics.duckdb. Keboola extractor uses DuckDB extension with
legacy client fallback. BigQuery extractor is remote-only via
DuckDB BQ extension (no data download).

62 tests passing.
2026-03-30 20:12:56 +02:00