Commit graph

64 commits

Author SHA1 Message Date
Petr
14d75d6229 Fix: correct OpenMetadata catalog URL path and add debug logging
- Change catalog URL from /explore/{fqn} to /table/{fqn}
- Add debug logging to see parsed tags, owners, tier from API response
2026-03-12 14:34:12 +01:00
Petr
a7faf70cb3 Allow self-signed certificates for OpenMetadata catalog (internal networks)
OpenMetadata catalog uses self-signed HTTPS certificate on internal networks.
Disable SSL verification in httpx client and suppress related warnings.
2026-03-12 14:12:44 +01:00
Petr
c5c24cb45b Implement OpenMetadata catalog integration (Phase 1)
Add OpenMetadata REST API connector and enricher to merge table/column metadata
from OpenMetadata catalog at sync and query time.

Changes:
- connectors/openmetadata/client.py: HTTP client for OM API
- connectors/openmetadata/enricher.py: Data enrichment with TTL cache
- tests/test_openmetadata_*: Unit tests for client and enricher
- src/config.py: Add catalog_fqn field to TableConfig
- src/data_sync.py: Use enricher in _generate_schema_yaml (catalog > BQ API > data_description.md)
- webapp/app.py: Initialize enricher, enrich catalog data with tags/tier/owners/url
- config/instance.yaml.example: Document openmetadata section

Features:
- FQN auto-derivation: bigquery.{table.id}
- TTL cache (default 1h) to avoid repeated API calls
- Graceful degradation: disabled if token missing, silent on HTTP errors
- Column description priority: catalog > BQ API > (none)
- Table description priority: catalog > data_description.md
2026-03-12 14:07:13 +01:00
Petr
8bb46a9e0a Add per-partition streaming sync and hybrid query architecture
Partitioned sync: iterates day-by-day instead of loading full dataset.
Each partition: query BQ -> stream to disk -> free RAM. Peak ~50 MB.
New helpers: _sync_single_partition, _cleanup_old_partitions, _generate_partition_dates.

Config: added partition_column_type (DATE/TIMESTAMP/DATETIME), query_mode (local/remote/hybrid).
DuckDB manager: hybrid architecture support (local Parquet + remote BQ tables).
Data sync: skips remote tables, filters by query_mode.

Tests: 113 passing (adapter, client, config, data_sync, duckdb_manager).
2026-03-12 13:20:41 +01:00
Petr
85c87ec375 Pass explicit bqstorage_client to to_arrow_iterable() for Storage API
Without explicit bqstorage_client parameter, to_arrow_iterable() silently
falls back to REST API pagination (~5K rows/sec). With explicit client,
it uses parallel gRPC streams via BQ Storage API (~300K rows/sec).

No temp table materialization - BQ already writes query results to an
internal temp table automatically. We just tell the reader to use the
fast gRPC path instead of slow HTTP pagination.
2026-03-12 10:51:44 +01:00
Petr
4f74543a12 Fix streaming: use RowIterator.to_arrow_iterable() not QueryJob
QueryJob only has to_arrow(), not to_arrow_iterable().
Must call query_job.result() first to get RowIterator,
which has the streaming to_arrow_iterable() method.
2026-03-11 20:15:35 +01:00
Petr
ee70da86c3 Stream BQ results to Parquet instead of loading into memory
Replace to_arrow() (loads entire result into RAM) with
to_arrow_iterable() (streams RecordBatches). Each batch is written
directly to disk via ParquetWriter - constant memory regardless
of table size. Prevents OOM on 8GB server for multi-million row tables.
2026-03-11 20:13:03 +01:00
Petr
a191ede28c Add columns and row_filter to TableConfig for selective BQ export
Propagate column selection and row filtering from data_description.md
through the BigQuery adapter to the BQ client. This enables exporting
only needed columns and applying date range filters at the SQL level,
critical for large DataView tables (e.g., 412-col unit_economics).
2026-03-11 19:37:04 +01:00
Petr
e26e47a071 Add BQ Storage API fallback to REST when readsessions permission missing 2026-03-11 13:59:09 +01:00
Petr
758910463b Add BigQuery data source adapter
BigQuery connector that syncs BQ tables to local Parquet files via PyArrow
(no CSV intermediate step). Supports full refresh, timestamp-based
incremental (via incremental_column), and partition-based sync strategies.

- connectors/bigquery/client.py: BQ API wrapper with ADC auth, parameterized
  queries, metadata cache, cross-project support (job project != data project)
- connectors/bigquery/adapter.py: DataSource implementation with merge/dedup
- src/config.py: Add incremental_column field to TableConfig
- 72 unit tests (mocked, no GCP SDK required)
2026-03-11 13:56:12 +01:00
Petr
b99ec576ca Add self-service data onboarding system
Table Registry as central source of truth (JSON) with atomic writes,
optimistic locking, audit logging, and data_description.md generation.
Existing readers (config.py, profiler.py) need zero changes.

Phase 1 - Discovery API:
  - discover_tables() on DataSource ABC + Keboola implementation
  - admin_required decorator with server-side recomputation
  - GET /api/admin/discover-tables endpoint

Phase 2 - Table Registry:
  - src/table_registry.py with CRUD, validation, migration from MD
  - Admin API: register/update/unregister with version locking
  - DELETE cascade cleans up per-user subscriptions

Phase 3 - Auto-Profiling:
  - profile_changed_tables() for incremental profiling
  - Non-fatal hook in sync_all() after successful sync

Phase 4 - Per-Table Subscriptions:
  - table_mode (all/explicit) with per-table toggles
  - GET/POST /api/table-subscriptions endpoints
  - Subscription status in catalog and dashboard views

Phase 5 - Smart Sync:
  - Python-generated rsync filter files (not shell YAML parsing)
  - sync_data.sh uses --filter="merge ..." for explicit mode

Phase 6 - Admin UI:
  - /admin/tables with discovery, registration modal, registry mgmt
  - Vanilla JS, matching existing design system
2026-03-09 14:25:37 +01:00
Petr
38b86127ed Branding cleanup: remove Keboola-specific references from docs and config
- server/deploy.sh: KEBOOLA_ENV_FILE -> SYNC_ENV_FILE
- server/ws-gateway.service, notify-bot.service: remove Keboola from descriptions
- .gitignore: generic comment for data directory
- CLAUDE.md, README.md, ARCHITECTURE.md: update paths from src/adapters to connectors/
- docs/DATA_SOURCES.md: update custom connector guide to connectors/ pattern
- connectors/jira/README.md: keboola-analyst -> data-analyst in config paths
- dev_docs/desktop-app.md: KeboolaAnalyst -> DataAnalyst branding
2026-03-09 12:22:27 +01:00
Petr
266e8573d3 Extract Keboola into connectors/keboola module
Move all Keboola-specific code out of src/ into connectors/keboola/:
- git mv src/keboola_client.py -> connectors/keboola/client.py
- Extract LocalKeboolaSource (855 lines) from data_sync.py -> connectors/keboola/adapter.py
- Rename to KeboolaDataSource with full env var validation
- Extend DataSource ABC with get_column_metadata() and get_source_name()
- Add dynamic connector registry via importlib in create_data_source()
- Refactor _generate_schema_yaml to use ABC methods (source_type, _schema_version: 2)
- Remove src/adapters/ (redundant facade layer)
- Remove Keboola validation from src/config.py (connector validates itself)
- Add 14 tests for factory, ABC defaults, env validation, dynamic lookup
2026-03-09 12:22:16 +01:00
Petr
86edd27655 Extract Jira into connectors/jira module
Move all Jira-specific code into a self-contained connector module:
- 22 files moved via git mv (transform, service, webhook, scripts,
  systemd units, tests, docs, bin helper)
- All imports updated to use connectors.jira.* paths
- Jira is now conditional: auto-detected via JIRA_DOMAIN env var
- Webapp registers Jira blueprint only when available
- Health service monitors Jira timers only when enabled
- Profiler loads Jira tables dynamically from filesystem
- Sync settings uses config-driven dependency validation
- Renamed keboola_platform_url -> custom_url in transform
- Updated deploy.sh, sudoers-deploy, backfill_gap.sh paths
- Fixed pytest.ini to skip live tests by default
2026-03-09 11:17:50 +01:00